Pre_GI Gene

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Host: NC_007005 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007005:3414579 Pseudomonas syringae pv. syringae B728a, complete genome

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
34145793415406828hypothetical protein
341544234175742133C-5 cytosine-specific DNA methylaseQuickGO ontologyBLASTP
34176303418121492hypothetical protein
34187963419257462hypothetical proteinBLASTP
341955434205881035Phage integrasePhage integrase N-terminal SAM-likeQuickGO ontologyBLASTP
34209183421364447hypothetical protein
34214973421922426hypothetical proteinBLASTP
34231683423527360hypothetical protein
34236093423962354hypothetical proteinBLASTP
34242613424794534hypothetical proteinBLASTP
34257513426734984hypothetical proteinBLASTP
3426758342778910325-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferaseQuickGO ontologyBLASTP
34279483428691744Chitin-binding domain 3QuickGO ontologyBLASTP
34288793429256378hypothetical proteinBLASTP
3429258343027110142OG-FeII oxygenase superfamilyQuickGO ontologyBLASTP
34304993431137639Isochorismatase hydrolaseQuickGO ontologyBLASTP
34313173431694378hypothetical proteinBLASTP
34317953432085291hypothetical proteinBLASTP
34324003433206807Cytochrome c class IQuickGO ontologyBLASTP
3433363343343674tRNA-CysQuickGO ontologyBLASTP
343363734353761740Feruloyl esteraseQuickGO ontologyBLASTP
343549534369011407RND efflux system outer membrane lipoprotein NodTQuickGO ontologyBLASTP
343690134400473147Hydrophobeamphiphile efflux-1 HAE1QuickGO ontologyBLASTP
344005034412521203Secretion protein HlyDQuickGO ontologyBLASTP