Pre_GI Gene

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Host: NC_006511 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006511:1579776 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
157977615821632388phenylalanyl-tRNA synthetase beta subunitQuickGO ontologyBLASTP
15821791583162984phenylalanyl-tRNA synthetase alpha subunitQuickGO ontologyBLASTP
1583464158382035750S ribosomal protein L20QuickGO ontologyBLASTP
1583871158406819850S ribosomal protein L35QuickGO ontologyBLASTP
1583940158411017150S ribosomal subunit protein AQuickGO ontologyBLASTP
15841641584706543translation initiation factor IF-3QuickGO ontologyBLASTP
158471015866381929threonyl-tRNA synthetaseQuickGO ontologyBLASTP
158753015887531224O-antigen polymeraseQuickGO ontologyBLASTP
15890761589282207hypothetical proteinBLASTP
15894551590309855putative DNARNA non-specific endonucleaseQuickGO ontologyBLASTP
15903061590620315hypothetical proteinBLASTP
15907901591722933putative outer membrane proteinQuickGO ontologyBLASTP
15917711592529759putative outer membrane proteinQuickGO ontologyBLASTP
159281815937509336-phosphofructokinase isozymeQuickGO ontologyBLASTP
15938471594137291hypothetical proteinBLASTP
15942441595104861hypothetical proteinBLASTP
15951471595683537hypothetical proteinBLASTP
15958321596500669putative hydrolaseQuickGO ontologyBLASTP
15966501597237588hypothetical proteinBLASTP
159737415987651392putative sodiumdicarboxylate symporterQuickGO ontologyBLASTP
15988681599110243cell division activator CedAQuickGO ontologyBLASTP
159947516017272253catalase HPIIQuickGO ontologyBLASTP