Pre_GI Gene

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Host: NC_009512 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009512:3334579 Pseudomonas putida F1, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
333457933356101032protein of unknown function DUF1527QuickGO ontologyBLASTP
333561033369651356hypothetical proteinBLASTP
33369623337267306hypothetical proteinBLASTP
333727733388151539hypothetical proteinBLASTP
33396483340013366hypothetical proteinBLASTP
33402173340633417hypothetical proteinBLASTP
33407193341657939domain of unknown function DUF1738QuickGO ontologyBLASTP
33417443342109366hypothetical proteinBLASTP
33422343342437204hypothetical proteinBLASTP
334257833443651788RelaxaseQuickGO ontologyBLASTP
334445333472422790ATPase involved in DNA repair-like proteinQuickGO ontologyBLASTP
33472353347804570hypothetical protein
334779433500612268hypothetical proteinBLASTP
33522823352860579NADPH dehydrogenase quinoneQuickGO ontologyBLASTP
33530273353410384putative transcriptional regulator MerR familyQuickGO ontologyBLASTP
335348033560892610exporter of the RND superfamily-like proteinQuickGO ontologyBLASTP
33561233356959837putative sigma E regulatory protein MucBRseBQuickGO ontologyBLASTP
335701033582931284hypothetical proteinBLASTP
33582963359060765short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
33590573359794738short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
335980433626742871aminotransferase class-IIIQuickGO ontologyBLASTP