Pre_GI: BLASTN Hits

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Query: NC_009698:2921097 Clostridium botulinum A str. Hall chromosome, complete genome

Start: 2921097, End: 2943301, Length: 22205

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium botulinum A strain Hall was received at Fort Detrick from Harvard University in 1947. The strain is presumably one from Dr. Ivan Hall's collection, but the exact strain number has been lost. This strain produces high amounts of type A toxin. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012563:32881243288124330917721054Clostridium botulinum A2 str. Kyoto, complete genome08201BLASTN svgBLASTP svg
NC_010520:31205003120500313949618997Clostridium botulinum A3 str. Loch Maree, complete genome06199BLASTN svgBLASTP svg
NC_014328:93839393839395781019418Clostridium ljungdahlii ATCC 49587 chromosome, complete genome7e-84319BLASTN svgBLASTP svg
NC_008593:16314381631438165059619159Clostridium novyi NT, complete genome4e-67264BLASTN svgBLASTP svg
NC_010674:61596361596363966223700Clostridium botulinum B str. Eklund 17B, complete genome1e-66262BLASTN svgBLASTP svg
NC_010723:57525457525460199426741Clostridium botulinum E3 str. Alaska E43, complete genome3e-64254BLASTN svgBLASTP svg
NC_003366:84200084200086047418475Clostridium perfringens str. 13, complete genome1e-51212BLASTN svgBLASTP svg
NC_004557:2078000*2078000210049622497Clostridium tetani E88, complete genome7e-50206BLASTN svgBLASTP svg
NC_008262:784878*78487882991045033Clostridium perfringens SM101, complete genome3e-49204BLASTN svgBLASTP svg
NC_021182:2059143*2059143208239023248Clostridium pasteurianum BC1, complete genome7e-47196BLASTN svgBLASTP svg
NC_003030:15100001510000154543435435Clostridium acetobutylicum ATCC 824, complete genome2e-44188BLASTN svgBLASTP svg
NC_010674:11244311124431114553121101Clostridium botulinum B str. Eklund 17B, complete genome4e-36161BLASTN svgBLASTP svg
NC_010723:10840001084000110630222303Clostridium botulinum E3 str. Alaska E43, complete genome6e-35157BLASTN svgBLASTP svg
NC_020291:12668851266885130737240488Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome5e-29137BLASTN svgBLASTP svg
NC_012563:2230403*2230403225235521953Clostridium botulinum A2 str. Kyoto, complete genome3e-27131BLASTN svgBLASTP svg
NC_010516:3845942*3845942386860822667Clostridium botulinum B1 str. Okra, complete genome1e-26129BLASTN svgBLASTP svg
NC_012563:3580000*3580000360253222533Clostridium botulinum A2 str. Kyoto, complete genome2e-25125BLASTN svgBLASTP svg
NC_010516:3196158*3196158321545819301Clostridium botulinum B1 str. Okra, complete genome1e-20109BLASTN svgBLASTP svg
NC_010520:3204480*3204480322378019301Clostridium botulinum A3 str. Loch Maree, complete genome3e-18101BLASTN svgBLASTP svg
NC_014654:23118182311818233086219045Halanaerobium sp. 'sapolanicus' chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_014150:29940002994000301678522786Brachyspira murdochii DSM 12563 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010516:20640272064027208498120955Clostridium botulinum B1 str. Okra, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_021182:37715233771523379409922577Clostridium pasteurianum BC1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_021182:4829000*4829000485931530316Clostridium pasteurianum BC1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012563:24660002466000248852922530Clostridium botulinum A2 str. Kyoto, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012225:1657248*1657248168304825801Brachyspira hyodysenteriae WA1, complete genome3e-1281.8BLASTN svgBLASTP svg
AC_000091:29762932976293300863132339Escherichia coli W3110 DNA, complete genome4e-1177.8BLASTN svgBLASTP svg
CP002185:3167738*3167738320702439287Escherichia coli W, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_010516:27772052777205280241925215Clostridium botulinum B1 str. Okra, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_011750:3407500*3407500343726129762Escherichia coli IAI39 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_012225:47800478008109933300Brachyspira hyodysenteriae WA1, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_021182:11880001188000121083922840Clostridium pasteurianum BC1, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_021182:40112940112942526224134Clostridium pasteurianum BC1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010674:11702641170264119243322170Clostridium botulinum B str. Eklund 17B, complete genome2e-1075.8BLASTN svgBLASTP svg
CU928160:3030324*3030324306823137908Escherichia coli IAI1 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010516:23740002374000239681422815Clostridium botulinum B1 str. Okra, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012225:28346422834642285938124740Brachyspira hyodysenteriae WA1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012751:1190206*1190206121514924944Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), complete7e-1073.8BLASTN svgBLASTP svg
NC_019908:24015772401577244617744601Brachyspira pilosicoli P43/6/78 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_018604:22535392253539227800524467Brachyspira pilosicoli WesB complete genome3e-0971.9BLASTN svgBLASTP svg
NC_018607:21115812111581214532233742Brachyspira pilosicoli B2904 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014330:76823276823281309944868Brachyspira pilosicoli 95/1000 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012563:122000*12200014417822179Clostridium botulinum A2 str. Kyoto, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010516:3234791*3234791325832823538Clostridium botulinum B1 str. Okra, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011653:331986*33198635451722532Thermosipho africanus TCF52B, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015682:14570041457004148205725054Thermodesulfobacterium sp. OPB45 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010520:28074292807429283431926891Clostridium botulinum A3 str. Loch Maree, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_021182:20135002013500203160018101Clostridium pasteurianum BC1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010520:11460001146000116884922850Clostridium botulinum A3 str. Loch Maree, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010516:127000*12700015115624157Clostridium botulinum B1 str. Okra, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010516:2567911*2567911258780819898Clostridium botulinum B1 str. Okra, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010520:15860001586000160832222323Clostridium botulinum A3 str. Loch Maree, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010520:2635750*2635750265654120792Clostridium botulinum A3 str. Loch Maree, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010718:46440546440548434419940Natranaerobius thermophilus JW/NM-WN-LF, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012563:2761570*2761570280230240733Clostridium botulinum A2 str. Kyoto, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_021182:1346261*1346261136580919549Clostridium pasteurianum BC1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_021182:96683996683998495918121Clostridium pasteurianum BC1, complete genome3e-0661.9BLASTN svgBLASTP svg