Pre_GI Gene

Some Help

Host: NC_021182 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:2013500 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2013500201489113922-succinylbenzoyl-CoA synthetaseQuickGO ontologyBLASTP
201489220160011110o-succinylbenzoic acid synthetaseQuickGO ontologyBLASTP
20160052016394390hypothetical proteinBLASTP
2016399201730190314-dihydroxy-2-naphthoate octaprenyltransferaseQuickGO ontologyBLASTP
20174932018317825geranylgeranyl pyrophosphate synthaseQuickGO ontologyBLASTP
20186792019035357NADHubiquinone oxidoreductase subunit 3 chain AQuickGO ontologyBLASTP
20190262019535510NADH-quinone oxidoreductase B subunitQuickGO ontologyBLASTP
20195282019965438NADHubiquinone oxidoreductase 27 kD subunitQuickGO ontologyBLASTP
201998120210931113NADHubiquinone oxidoreductase 49 kD subunit 7QuickGO ontologyBLASTP
202110620221431038NADHubiquinone oxidoreductase subunit 1 chain HQuickGO ontologyBLASTP
20221492022541393NADHubiquinone oxidoreductase chain I-like proteinQuickGO ontologyBLASTP
20225382023029492NADHubiquinone oxidoreductase subunit 6 chain JQuickGO ontologyBLASTP
20230302023338309NADHubiquinone oxidoreductase subunit 11 or 4L chain KQuickGO ontologyBLASTP
202334720252001854proton-translocating NADH-quinone oxidoreductase chain LQuickGO ontologyBLASTP
202520120267241524proton-translocating NADH-quinone oxidoreductase chain MQuickGO ontologyBLASTP
202672420281301407proton-translocating NADH-quinone oxidoreductase chain NQuickGO ontologyBLASTP
20282742029167894hydrogenase NiFe small subunit HydAQuickGO ontologyBLASTP
202948420306831200cell wall-associated hydrolase invasion-associated proteinQuickGO ontologyBLASTP
20308052031098294hypothetical protein
20313042031600297hypothetical protein