Pre_GI Gene

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Host: NC_021182 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:2059143 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
20591432059550408putative transcriptional regulatorQuickGO ontologyBLASTP
20598042060082279Ribosomal RNA adenine dimethylaseQuickGO ontology
20602292061137909phenazine biosynthesis protein PhzF familyQuickGO ontologyBLASTP
20613002061818519hypothetical protein
206240120661623762phosphoribosylformylglycinamidine synthase clade IIQuickGO ontologyBLASTP
20669292067408480phosphoribosylaminoimidazole carboxylase PurE proteinQuickGO ontologyBLASTP
20674082068118711phosphoribosylaminoimidazole-succinocarboxamide synthaseQuickGO ontologyBLASTP
206814420695531410amidophosphoribosyltransferaseQuickGO ontologyBLASTP
20695742070569996phosphoribosylaminoimidazole synthetaseQuickGO ontologyBLASTP
20705572071174618phosphoribosylglycinamide formyltransferase formyltetrahydrofolate-dependentQuickGO ontologyBLASTP
207156120730631503phosphoribosylaminoimidazolecarboxamide formyltransferaseIMP cyclohydrolaseQuickGO ontologyBLASTP
207316520744151251phosphoribosylamine--glycine ligaseQuickGO ontologyBLASTP
20745602075162603protein of unknown function DUF1836QuickGO ontologyBLASTP
20754552076105651channel protein hemolysin III familyQuickGO ontologyBLASTP
20765302076946417Integral membrane protein possibly involved in chromosome condensationQuickGO ontologyBLASTP
20770122077371360crcB proteinQuickGO ontologyBLASTP
20775592078209651hypothetical protein
207859020812022613DNA polymerase IQuickGO ontologyBLASTP
20812302081826597dephospho-CoA kinaseQuickGO ontologyBLASTP
20818362082390555soluble lytic murein transglycosylase-like proteinQuickGO ontologyBLASTP