Pre_GI: BLASTN Hits

Some Help

Query: NC_002947:4604582 Pseudomonas putida KT2440, complete genome

Start: 4604582, End: 4628676, Length: 24095

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002947:737924*73792476633928416Pseudomonas putida KT2440, complete genome03961BLASTN svgBLASTP svg
NC_002947:53864895386489541416727679Pseudomonas putida KT2440, complete genome03959BLASTN svgBLASTP svg
NC_015733:1555476*1555476160259947124Pseudomonas putida S16 chromosome, complete genome03953BLASTN svgBLASTP svg
NC_015733:11799771179977119809918123Pseudomonas putida S16 chromosome, complete genome03953BLASTN svgBLASTP svg
NC_004578:35970833597083362009923017Pseudomonas syringae pv. tomato str. DC3000, complete genome0694BLASTN svgBLASTP svg
NC_004578:26715082671508269955228045Pseudomonas syringae pv. tomato str. DC3000, complete genome0694BLASTN svgBLASTP svg
NC_004578:21246821246824209929632Pseudomonas syringae pv. tomato str. DC3000, complete genome0694BLASTN svgBLASTP svg
NC_004578:20738207386960648869Pseudomonas syringae pv. tomato str. DC3000, complete genome0694BLASTN svgBLASTP svg
NC_004578:1190000*1190000121945029451Pseudomonas syringae pv. tomato str. DC3000, complete genome0694BLASTN svgBLASTP svg
NC_004578:4499143*4499143452348624344Pseudomonas syringae pv. tomato str. DC3000, complete genome0694BLASTN svgBLASTP svg
NC_004578:47813264781326481642335098Pseudomonas syringae pv. tomato str. DC3000, complete genome0694BLASTN svgBLASTP svg
NC_004578:49400004940000496327423275Pseudomonas syringae pv. tomato str. DC3000, complete genome0694BLASTN svgBLASTP svg
NC_004578:5336773*5336773541660879836Pseudomonas syringae pv. tomato str. DC3000, complete genome0694BLASTN svgBLASTP svg
NC_004578:59167115916711594513828428Pseudomonas syringae pv. tomato str. DC3000, complete genome0694BLASTN svgBLASTP svg
NC_004578:60899586089958612236632409Pseudomonas syringae pv. tomato str. DC3000, complete genome0694BLASTN svgBLASTP svg
NC_004578:61386696138669616309624428Pseudomonas syringae pv. tomato str. DC3000, complete genome0694BLASTN svgBLASTP svg
NC_004578:895019*89501992169226674Pseudomonas syringae pv. tomato str. DC3000, complete genome0694BLASTN svgBLASTP svg
NC_004578:40613724061372409399732626Pseudomonas syringae pv. tomato str. DC3000, complete genome0686BLASTN svgBLASTP svg
NC_004578:4465247*4465247448346018214Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-142513BLASTN svgBLASTP svg
NC_002947:4484824*4484824451609931276Pseudomonas putida KT2440, complete genome3e-95357BLASTN svgBLASTP svg
NC_020209:1847895*1847895187267824784Pseudomonas poae RE*1-1-14, complete genome2e-81311BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-44188BLASTN svgBLASTP svg
NC_004578:32416183241618326508823471Pseudomonas syringae pv. tomato str. DC3000, complete genome7e-44186BLASTN svgBLASTP svg
NC_015733:3923800*3923800394679722998Pseudomonas putida S16 chromosome, complete genome1e-39172BLASTN svgBLASTP svg
NC_007005:5500196*5500196552713626941Pseudomonas syringae pv. syringae B728a, complete genome4e-39170BLASTN svgBLASTP svg
NC_009439:44289044289048900846119Pseudomonas mendocina ymp, complete genome4e-33151BLASTN svgBLASTP svg
NC_009439:3394174*3394174341925525082Pseudomonas mendocina ymp, complete genome4e-33151BLASTN svgBLASTP svg
NC_009439:20545205454442723883Pseudomonas mendocina ymp, complete genome4e-33151BLASTN svgBLASTP svg
NC_009439:12978511297851133481436964Pseudomonas mendocina ymp, complete genome4e-33151BLASTN svgBLASTP svg
NC_009439:1174432*1174432119973625305Pseudomonas mendocina ymp, complete genome4e-33151BLASTN svgBLASTP svg
NC_005773:48992524899252493544536194Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-30141BLASTN svgBLASTP svg
NC_004578:44329834432983445709924117Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-29137BLASTN svgBLASTP svg
NC_010501:26095672609567264709937533Pseudomonas putida W619, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_020209:997385*997385104138844004Pseudomonas poae RE*1-1-14, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015379:67145456714545674216027616Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-1695.6BLASTN svgBLASTP svg
NC_020209:46439014643901466711323213Pseudomonas poae RE*1-1-14, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010501:36715173671517370459933083Pseudomonas putida W619, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015740:14191014191016419522286Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete5e-1487.7BLASTN svgBLASTP svg
NC_010501:27960002796000281869522696Pseudomonas putida W619, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015422:1643000*1643000166547622477Alicycliphilus denitrificans K601 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015740:29985002998500301617517676Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-1179.8BLASTN svgBLASTP svg
NC_015740:34862263486226350909922874Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-1179.8BLASTN svgBLASTP svg
NC_015740:36783423678342371659938258Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-1179.8BLASTN svgBLASTP svg
NC_015740:40724154072415409719824784Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-1179.8BLASTN svgBLASTP svg
NC_007952:19342491934249195801423766Burkholderia xenovorans LB400 chromosome 2, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_002947:34923793492379351709924721Pseudomonas putida KT2440, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_002506:298868*29886831909920232Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete1e-0869.9BLASTN svgBLASTP svg
NC_002506:37062937062943982869200Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete1e-0869.9BLASTN svgBLASTP svg
NC_010501:4311873*4311873433434022468Pseudomonas putida W619, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014910:17650651765065179274827684Alicycliphilus denitrificans BC chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015138:21101492110149213484224694Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete1e-0869.9BLASTN svgBLASTP svg
NC_010170:44096834409683443529725615Bordetella petrii, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009439:49137674913767493609922333Pseudomonas mendocina ymp, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007005:58822055882205592100338799Pseudomonas syringae pv. syringae B728a, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005773:26417152641715266373322019Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012791:2423466*2423466246659343128Variovorax paradoxus S110 chromosome 1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_021150:2451500*2451500248001928520Azotobacter vinelandii CA6, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_020064:29218092921809295042328615Serratia marcescens FGI94, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012560:2451500*2451500248009928600Azotobacter vinelandii DJ, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008463:282565*28256532073638172Pseudomonas aeruginosa UCBPP-PA14, complete genome3e-0661.9BLASTN svgBLASTP svg