Pre_GI Gene

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Host: NC_015733 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015733:3923800 Pseudomonas putida S16 chromosome, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
39238003924510711phosphate ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
39245213925168648polar amino acid ABC transporter inner membrane subunitQuickGO ontologyBLASTP
39251693925834666polar amino acid ABC transporter inner membrane subunitQuickGO ontologyBLASTP
39258573926642786amino acid ABC transporter periplasmic amino acid-binding proteinQuickGO ontologyBLASTP
39269053927591687GntR family transcriptional regulatorQuickGO ontologyBLASTP
39277593928070312hypothetical protein
392824139304872247GAF and PASPAC sensor-containing diguanylate cyclasephosphodiesteraseQuickGO ontologyBLASTP
39304843930804321methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
39327853933066282hypothetical protein
39335393933769231putative RHS family proteinQuickGO ontologyBLASTP
39352753935466192putative RHS family proteinQuickGO ontologyBLASTP
39355843936093510LuxR family transcriptional regulatorQuickGO ontology
3936400393647273tRNA-GlyQuickGO ontology
39365373937097561CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferaseQuickGO ontologyBLASTP
393713039389531824excinuclease ABC subunit CQuickGO ontologyBLASTP
39389603939583624DNA-binding response regulator GacAQuickGO ontologyBLASTP
39396623940003342XRE family transcriptional regulatorQuickGO ontologyBLASTP
39401663940603438GCN5-like N-acetyltransferaseQuickGO ontologyBLASTP
39406613941047387hypothetical proteinBLASTP
394117639427921617phosphate transporterQuickGO ontologyBLASTP
39429253943626702glutathione S-transferase domain-containing proteinQuickGO ontologyBLASTP
39437083944205498hypothetical proteinBLASTP
394426639456451380amino acid permease-associated proteinQuickGO ontologyBLASTP
39459013946797897LysR family transcriptional regulatorQuickGO ontologyBLASTP