Pre_GI: BLASTP Hits

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Query: NC_015703:5865921:5895899 Runella slithyformis DSM 19594 chromosome, complete genome

Start: 5895899, End: 5896768, Length: 870

Host Lineage: Runella slithyformis; Runella; Cytophagaceae; Cytophagales; Bacteroidetes; Bacteria

General Information: Environment: Fresh water, Host; Isolation: Fresh water lake; USA, Louisiana, Baton; Temp: Psychrophile. This is a species of curved, nonflexible, pink bacteria. The species is of interest because it is able to grow at temperatures as low as 4°C. The species epithet is derived from slithy, a nonsense word from Lewis Carroll's Jabberwocky for a fictional organism that is 'slithy' and the Latin word 'suffix' meaning '-like, in the shape of', yielding the Neo-Latin word 'slithyformis' meaning 'slithy in form'.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012881:2957309:296862029686202969513894Desulfovibrio salexigens DSM 2638, complete genometranscriptional regulator, AraC family2e-31136
NC_015730:921735:939071939071939925855Roseobacter litoralis Och 149 chromosome, complete genomeHTH-type AraC family transcriptional regulator1e-26120
NC_004663:2935060:295745829574582958405948Bacteroides thetaiotaomicron VPI-5482, complete genometranscriptional regulator9e-21100
NC_010002:3399770:341701734170173417997981Delftia acidovorans SPH-1, complete genometranscriptional regulator, AraC family4e-1892
NC_004129:1741816:176003317600331760980948Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AraC family4e-1789
NC_004663:5437794:5437794543779454389211128Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein6e-1788.2
NC_015563:4093650:410028141002814101261981Delftia sp. Cs1-4 chromosome, complete genomeAraC family transcriptional regulator1e-1687
NC_016935:3819500:382494838249483825880933Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator7e-1684.7
NC_015690:3269000:327450832745083275440933Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator9e-1684.3
NC_011146:1699702:170634617063461707206861Geobacter bemidjiensis Bem, complete genometranscriptional regulator, AraC family1e-1584.3
NC_003909:1205605:122746412274641228366903Bacillus cereus ATCC 10987, complete genometranscriptional regulator, AraC family4e-1582
NC_016830:2247789:226051622605162261385870Pseudomonas fluorescens F113 chromosome, complete genomearaC family transcriptional regulator5e-1478.6
NC_017219:1830353:184169718416971842557861Bifidobacterium longum subsp. infantis ATCC 15697, complete genometranscriptional regulator8e-1477.8
NC_017218:1166844:117820011782001179060861Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomebacterial transcription activator, effector-binding domain protein8e-1477.8
NC_011593:1830500:184190718419071842767861Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,transcription activator, effector binding8e-1477.8
NC_015379:4630367:465120246512024652071870Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, AraC family1e-1377.4
NC_010001:1806000:181448218144821815366885Clostridium phytofermentans ISDg, complete genometranscriptional regulator, AraC family4e-1375.5
NC_011898:3159411:319981931998193200712894Clostridium cellulolyticum H10, complete genometranscriptional regulator, AraC family4e-1272.4
NC_011830:4234392:423728342372834238158876Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, AraC family9e-1270.9
NC_015733:1976752:199008919900891990910822Pseudomonas putida S16 chromosome, complete genomeAraC family transcriptional regulator2e-1170.1
NC_012660:4149487:415869441586944159563870Pseudomonas fluorescens SBW25 chromosome, complete genomeputative AraC family transcriptional regulator2e-1170.1
NC_011777:161505:180382180382181227846Bacillus cereus AH820 plasmid pAH820_272, complete sequencetranscriptional activator, AraC family2e-1169.7
NC_014376:1217000:125081512508151251648834Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional regulator, AraC family5e-1168.6
NC_007508:2072738:209256320925632093486924Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative transcriptional regulator, AraC family7e-1168.2
NC_012881:2957309:296953829695382969999462Desulfovibrio salexigens DSM 2638, complete genometranscription activator effector binding1e-1067.8
UCMB5137:1676568:168813616881361689008873Bacillus atrophaeus UCMB-5137putative AraC/XylS family transcriptional regulator8e-1167.8
NC_014479:509919:531264531264532136873Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative AraC/XylS family transcriptional regulator4e-1065.5
NC_020453:7826358:785191078519107852845936Agromonas oligotrophica S58 DNA, complete genomeAraC family transcriptional regulator4e-1065.5
NC_015379:4630367:463835446383544639211858Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, AraC family8e-1064.7
NC_020064:2299950:230477223047722305650879Serratia marcescens FGI94, complete genometranscriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain1e-0964.3
NC_014624:2912527:292261829226182923523906Eubacterium limosum KIST612 chromosome, complete genomeAraC family transcription regulator9e-1064.3
NC_014364:773500:786583786583787473891Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, AraC family1e-0963.9
NC_009617:2355662:237497723749772375852876Clostridium beijerinckii NCIMB 8052 chromosome, complete genometranscription activator, effector binding1e-0963.9
NC_020291:5752099:575858357585835759473891Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, AraC family2e-0963.5
NC_020244:516993:541859541859542731873Bacillus subtilis XF-1, complete genomeputative transcriptional regulator3e-0962.8
NC_019896:3491000:349471934947193495597879Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein9e-0961.2
NC_015500:159199:166509166509167342834Treponema brennaborense DSM 12168 chromosome, complete genometranscriptional regulator, AraC family1e-0860.8
NC_017195:517344:540528540528541400873Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completetranscriptional regulator, AraC family1e-0860.8
NC_015738:1707173:1713840171384017148771038Eggerthella sp. YY7918, complete genomehypothetical protein9e-0960.8
NC_019842:2575000:258107725810772581949873Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,HTH-type transcriptional regulator9e-0960.8
NC_009615:1446132:144746414474641448081618Parabacteroides distasonis ATCC 8503 chromosome, complete genometranscriptional regulator1e-0860.5
NC_012779:610509:614198614198615088891Edwardsiella ictaluri 93-146, complete genometranscriptional regulator, AraC family2e-0860.1
NC_011894:2385834:238993223899322390918987Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family2e-0859.7
NC_014973:243000:247572247572248330759Geobacter sp. M18 chromosome, complete genometwo component AraC family transcriptional regulator2e-0859.7
NC_014976:2735423:275312427531242753996873Bacillus subtilis BSn5 chromosome, complete genomeputative AraC/XylS family transcriptional regulator3e-0859.7
NC_014654:1113116:1115573111557311171861614Halanaerobium sp. 'sapolanicus' chromosome, complete genometwo component transcriptional regulator, AraC family3e-0859.3
NC_014720:154111:1959181959181974771560Caldicellulosiruptor kronotskyensis 2002 chromosome, completetwo component transcriptional regulator, arac family3e-0859.3
NC_020134:2832857:285088528508852851793909Clostridium stercorarium subsp. stercorarium DSM 8532, completetranscriptional regulator, AraC family3e-0859.3
NC_015690:3941113:397750939775093978423915Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator4e-0858.9
NC_015385:2505977:252237725223772523315939Treponema succinifaciens DSM 2489 chromosome, complete genometranscriptional regulator with cupin sensor, AraC family4e-0858.9
NC_016935:1365463:139694713969471397861915Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator4e-0858.9
NC_016078:3130573:313408031340803134979900Pelagibacterium halotolerans B2 chromosome, complete genomeAraC family transcriptional regulator4e-0858.9
NC_011757:5102732:512939951293995130358960Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, AraC family6e-0858.5
NC_003366:461602:477962477962478819858Clostridium perfringens str. 13, complete genomeprobable transcriptional regulator5e-0858.5
NC_016627:1485799:152182415218241522717894Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA-binding domain-containing protein5e-0858.5
NC_017188:461177:494859494859495749891Bacillus amyloliquefaciens TA208 chromosome, complete genometranscriptional regulator (AraC/XylS family) protein5e-0858.5
NC_017191:467207:500881500881501771891Bacillus amyloliquefaciens XH7 chromosome, complete genomeAraC/XylS family transcriptional regulator protein5e-0858.5
NC_010681:1234500:125113612511361252074939Burkholderia phytofirmans PsJN chromosome 1, complete sequencetranscriptional regulator, AraC family9e-0857.8
NC_018720:627642:644875644875645729855Bifidobacterium asteroides PRL2011 chromosome, complete genometranscriptional regulator, AraC family1e-0757.4
NC_016627:841269:842719842719843597879Clostridium clariflavum DSM 19732 chromosome, complete genomehypothetical protein1e-0757.4
NC_019903:1312843:133614213361421337074933Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,DNA-binding domain-containing protein2e-0757
NC_019897:1577015:157852915785291579446918Thermobacillus composti KWC4 chromosome, complete genomeDNA-binding domain-containing protein1e-0757
NC_012997:2941627:2955731295573129567531023Teredinibacter turnerae T7901, complete genometranscriptional regulator, AraC family2e-0756.6
NC_013204:1759985:1771263177126317723001038Eggerthella lenta DSM 2243, complete genometranscriptional regulator, AraC family2e-0756.6
NC_016935:2302055:232616123261612327048888Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator2e-0756.6
NC_009089:3889811:391633739163373916819483Clostridium difficile 630, complete genomeAraC-family transcriptional regulator2e-0756.6
NC_015690:1772015:179601417960141796901888Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator2e-0756.6
NC_014323:2680085:2709131270913127102581128Herbaspirillum seropedicae SmR1 chromosome, complete genomeAraC family transcription regulator protein2e-0756.6
NC_006270:4014000:402790140279014028350450Bacillus licheniformis ATCC 14580, complete genomeputative DNA Gyrase inhibitor2e-0756.6
NC_014206:1694330:172848917284891729271783Geobacillus sp. C56-T3 chromosome, complete genomeAraC family transcriptional regulator2e-0756.6
NC_012778:1778654:178268317826831783558876Eubacterium eligens ATCC 27750, complete genomeAraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR2e-0756.2
NC_009438:236424:238827238827239708882Shewanella putrefaciens CN-32 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0756.2
NC_012796:129500:129892129892130776885Desulfovibrio magneticus RS-1, complete genomeAraC family transcriptional regulator4e-0755.8
NC_010170:4463000:447239344723934473199807Bordetella petrii, complete genometranscriptional regulator, AraC family4e-0755.8
NC_009454:1577319:158710915871091588020912Pelotomaculum thermopropionicum SI, complete genomehypothetical protein4e-0755.8
NC_016633:1130705:114672511467251147495771Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeresponse regulator containing CheY-like receiver domain and AraC-type DNA-binding domain3e-0755.8
NC_015424:4251369:425136942513694252271903Aeromonas veronii B565 chromosome, complete genomeputative HTH-type transcriptional regulator YqhC5e-0755.5
NC_015690:4361000:442089344208934421756864Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator4e-0755.5
NC_016935:4117485:418696441869644187827864Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator4e-0755.5
NC_010501:3013103:302473330247333025197465Pseudomonas putida W619, complete genometranscriptional regulator, AraC family4e-0755.5
NC_015275:3594890:359489035948903595747858Clostridium lentocellum DSM 5427 chromosome, complete genometranscriptional regulator, AraC family4e-0755.5
NC_013406:1217385:127150412715041272373870Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator4e-0755.5
NC_014008:669170:679249679249680019771Coraliomargarita akajimensis DSM 45221 chromosome, complete genometranscriptional regulator, AraC family6e-0755.1
NC_010001:851671:877705877705878502798Clostridium phytofermentans ISDg, complete genometranscriptional regulator, AraC family6e-0755.1
NC_014624:2668157:271610827161082716983876Eubacterium limosum KIST612 chromosome, complete genometranscriptional regulator5e-0755.1
NC_011830:2940500:2949851294985129522582408Desulfitobacterium hafniense DCB-2, complete genome5e-0755.1
NC_011749:34056:423404234042756417Escherichia coli UMN026 plasmid p1ESCUM, complete sequencetranscriptionnal regulator involved in tetracycline resistance5e-0755.1
NC_010520:725312:728120728120729007888Clostridium botulinum A3 str. Loch Maree, complete genometranscriptional regulator, AraC family5e-0755.1
NC_010939:405477:414597414597415013417Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeTransposon Tn10 TetD protein5e-0755.1
CU928145:4950723:497605449760544976470417Escherichia coli 55989 chromosome, complete genomeputative operon control protein5e-0755.1
NC_011748:4950723:497605449760544976470417Escherichia coli 55989, complete genomeputative operon control protein5e-0755.1
NC_017328:1075535:110484811048481105264417Shigella flexneri 2002017 chromosome, complete genomeputative transcriptional regulator TetD5e-0755.1
NC_020418:448687:460865460865461281417Morganella morganii subsp. morganii KT, complete genomehypothetical protein5e-0755.1
NC_015690:1726000:1761079176107917627251647Paenibacillus mucilaginosus KNP414 chromosome, complete genometwo component AraC family transcriptional regulator7e-0754.7
NC_016935:2256000:2291119229111922927651647Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator7e-0754.7
NC_021150:1627347:164229116422911643196906Azotobacter vinelandii CA6, complete genometranscriptional regulator, AraC family7e-0754.7
NC_012560:1627334:164227816422781643183906Azotobacter vinelandii DJ, complete genometranscriptional regulator, AraC family7e-0754.7
NC_017265:3724500:374583037458303746723894Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative DNA-binding transcriptional regulator7e-0754.7
NC_020272:1384525:139716613971661398047882Bacillus amyloliquefaciens IT-45, complete genomeHTH-type transcriptional regulator YdeE9e-0754.3
NC_010501:3448389:346606534660653466964900Pseudomonas putida W619, complete genometranscriptional regulator, AraC family9e-0754.3
NC_014963:2759978:277130727713072772194888Terriglobus saanensis SP1PR4 chromosome, complete genomeAraC family transcriptional regulator1e-0654.3
NC_008261:1249595:1267397126739712689171521Clostridium perfringens ATCC 13124, complete genometranscriptional regulator, AraC family1e-0654.3
NC_015428:193817:211001211001211951951Lactobacillus buchneri NRRL B-30929 chromosome, complete genomeAraC family transcriptional regulator1e-0653.9
NC_008262:1139500:114416611441661144918753Clostridium perfringens SM101, complete genomeDNA-binding response regulator1e-0653.9
NC_016935:2302055:231539223153922316270879Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator1e-0653.9
NC_015589:1523203:152804015280401529008969Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehelix-turn-helix- domain-containing protein AraC type1e-0653.9
NC_008740:3259962:327391832739183274850933Marinobacter aquaeolei VT8, complete genomehelix-turn-helix- domain containing protein, AraC type1e-0653.9
NC_013406:4478000:448353744835374484400864Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator2e-0653.5
NC_016631:6081384:609364760936476094531885Granulicella mallensis MP5ACTX8 chromosome, complete genomeAraC family transcriptional regulator2e-0653.5
NC_011985:3869998:388680038868003887690891Agrobacterium radiobacter K84 chromosome 1, complete genometranscriptional regulator protein1e-0653.5
NC_010634:3905369:393070839307083931601894Yersinia pseudotuberculosis PB1/+, complete genomeAraC family transcriptional regulator2e-0653.1
NC_004088:3859173:388047038804703881363894Yersinia pestis KIM, complete genomeAraC-type regulatory protein2e-0653.1
NC_006155:3992818:401925140192514020144894Yersinia pseudotuberculosis IP 32953, complete genomeAraC-family regulatory protein2e-0653.1
NC_015520:2821406:2821406282140628230011596Mahella australiensis 50-1 BON chromosome, complete genomeAraC family two component transcriptional regulator2e-0653.1
NC_014500:3744705:3746639374663937476791041Dickeya dadantii 3937 chromosome, complete genomeAraC family transcriptional regulator2e-0653.1
NC_014366:1663034:1664567166456716656041038Gamma proteobacterium HdN1, complete genometranscriptional regulator, AraC family2e-0653.1
NC_008261:1332864:133755413375541338306753Clostridium perfringens ATCC 13124, complete genomeDNA-bindng response regulator, AraC family2e-0653.1
NC_003366:1122654:112669011266901127442753Clostridium perfringens str. 13, complete genometwo-component response regulator2e-0653.1
NC_016894:3935161:395103139510313951900870Acetobacterium woodii DSM 1030 chromosome, complete genomeAraC family transcriptional regulator2e-0653.1
NC_005810:3333000:333311133331113334004894Yersinia pestis biovar Microtus str. 91001, complete genomeAraC family transcription regulator2e-0653.1
NC_008150:3430000:345135934513593452252894Yersinia pestis Antiqua, complete genomeAraC-family regulatory protein2e-0653.1
NC_003366:255480:290151290151290909759Clostridium perfringens str. 13, complete genomeprobable transcriptional regulator2e-0653.1
NC_017168:341233:363240363240364133894Yersinia pestis A1122 chromosome, complete genomeAraC-family regulatory protein2e-0653.1
NC_017160:737000:737054737054737947894Yersinia pestis D182038 chromosome, complete genomeAraC-family regulatory protein2e-0653.1
NC_017154:734875:734875734875735768894Yersinia pestis D106004 chromosome, complete genomeAraC-family regulatory protein2e-0653.1
NC_014029:792719:792719792719793612894Yersinia pestis Z176003 chromosome, complete genomeAraC-family regulatory protein2e-0653.1
NC_009708:692508:692508692508693401894Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeAraC family transcriptional regulator2e-0653.1
NC_009381:522731:522731522731523624894Yersinia pestis Pestoides F chromosome, complete genomeAraC family transcription regulator2e-0653.1
NC_003143:741169:741169741169742062894Yersinia pestis CO92, complete genomeAraC-family regulatory protein2e-0653.1
NC_008149:650706:650706650706651599894Yersinia pestis Nepal516, complete genomeAraC-family regulatory protein2e-0653.1
NC_015224:3820338:385490238549023855795894Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,AraC family transcription regulator3e-0652.8
NC_008800:3955284:397664139766413977534894Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,AraC family transcription regulator3e-0652.8
NC_013205:2332174:234776623477662348590825Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, AraC family3e-0652.8
NC_015519:1888917:1901250190125019028631614Tepidanaerobacter sp. Re1 chromosome, complete genomeAraC family two component transcriptional regulator3e-0652.8
NC_011601:2139188:218185521818552182772918Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomepdu/cob regulatory protein3e-0652.8
NC_016935:4367000:440287544028754403759885Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator3e-0652.8
NC_004431:4319152:4323460432346043245151056Escherichia coli CFT073, complete genomehypothetical protein2e-0652.8
NC_008563:4707826:4724306472430647253611056Escherichia coli APEC O1, complete genomehypothetical protein2e-0652.8
NC_012880:2871480:288633428863342887275942Dickeya dadantii Ech703, complete genometranscriptional regulator, AraC family2e-0652.8
NC_011745:3405520:3408437340843734094921056Escherichia coli ED1a chromosome, complete genomehypothetical protein2e-0652.8
NC_009328:3322802:3356777335677733578771101Geobacillus thermodenitrificans NG80-2 chromosome, complete genomesugar ABC transporter permease3e-0652.4
NC_020134:1328302:132830213283021329168867Clostridium stercorarium subsp. stercorarium DSM 8532, completeAraC family HTH transcriptional regulator4e-0652.4
NC_015690:1772015:178524117852411786125885Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator5e-0652
NC_009617:3263413:327836432783643279257894Clostridium beijerinckii NCIMB 8052 chromosome, complete genometranscription activator, effector binding6e-0651.6
NC_009483:3644677:366996336699633670763801Geobacter uraniireducens Rf4 chromosome, complete genomeresponse regulator receiver protein6e-0651.6
NC_015977:3215770:321577032157703216591822Roseburia hominis A2-183 chromosome, complete genomeAraC family transcriptional regulator8e-0651.2
NC_008525:561000:561046561046561876831Pediococcus pentosaceus ATCC 25745, complete genomeAraC-like transcriptional regulator (HTH and ligand binding domain)8e-0651.2
NC_005966:1832066:184087018408701841769900Acinetobacter sp. ADP1, complete genomeputative transcription regulator (AraC family)8e-0651.2
NC_010067:3538169:354827335482733549157885Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein9e-0651.2
NC_009778:1717458:174712117471211747495375Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein9e-0651.2
NC_020210:1275031:134529713452971346094798Geobacillus sp. GHH01, complete genometwo-component response regulator1e-0550.8