Pre_GI Gene

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Host: NC_011985 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011985:3869998 Agrobacterium radiobacter K84 chromosome 1, complete genome

Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain has been developed for worldwide commercial use to control crown gall. This species is used commercially to control crown gall, a tumorogenic plant disease caused by the ubiquitous soil-borne pathogen Agrobacterium tumefaciens, which affects susceptible woody plants worldwide. The pathogen is responsible for nursery and orchard losses among stone fruit trees, grapes, apples, pears, nut trees, caneberries, clematis, hops, kiwifruit, persimmons, roses and many ornamental annuals, trees and shrubs. Infected plants are usually weakened and unproductive due to their damaged root system.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
38699983870930933type IV secretion protein AvhB6QuickGO ontologyBLASTP
38709343871167234BLASTP
38711643871859696type IV secretion protein AvhB5QuickGO ontologyBLASTP
387185938742462388type IV secretion protein AvhB4QuickGO ontologyBLASTP
38742183874556339type IV secretion protein AvhB3QuickGO ontologyBLASTP
38745623874864303type IV secretion protein avhB2QuickGO ontologyBLASTP
38748613875529669type IV secretion protein AvhB1QuickGO ontologyBLASTP
38755323876071540hypothetical proteinBLASTP
38763113876523213transcriptional regulator proteinQuickGO ontology
38768703877772903nopaline catabolism transcriptional regulator proteinQuickGO ontologyBLASTP
38780683878736669nopaline ABC transporterQuickGO ontologyBLASTP
38787413879577837ABC transporter membrane spanning protein opineQuickGO ontologyBLASTP
38795703880418849nopaline binding protein of ABC transporterQuickGO ontologyBLASTP
388053638817771242hypothetical proteinBLASTP
38818283882307480transcriptional regulator proteinQuickGO ontologyBLASTP
38825743882792219hypothetical proteinBLASTP
38832653883483219hypothetical protein
38834863883785300hypothetical protein
388399738854121416hypothetical proteinBLASTP
388540938866561248transporter proteinQuickGO ontologyBLASTP
38868003887690891transcriptional regulator proteinQuickGO ontologyBLASTP
38880223889017996hypothetical proteinBLASTP
38896583889819162hypothetical protein
388995638918691914Ti-type conjugative transfer system protein TraGQuickGO ontologyBLASTP