Pre_GI Gene

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Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:1806000 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
18064081806950543carbonic anhydraseQuickGO ontologyBLASTP
18071591808109951D-isomer specific 2-hydroxyacid dehydrogenase NAD-bindingQuickGO ontologyBLASTP
180843318099051473integral membrane sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
18099071810596690two component transcriptional regulator winged helix familyQuickGO ontologyBLASTP
18108221811781960ABC transporter relatedQuickGO ontologyBLASTP
18117781812542765ABC-2 type transporterQuickGO ontology
18125391813093555hypothetical protein
181312618143131188protein of unknown function DUF347QuickGO ontologyBLASTP
18144821815366885transcriptional regulator AraC familyQuickGO ontologyBLASTP
181559218167371146putative esteraseQuickGO ontologyBLASTP
181739018190931704methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
18192911820217927C4-dicarboxylate transportermalic acid transport proteinQuickGO ontologyBLASTP
18202331820706474C_GCAxxG_C_C family proteinQuickGO ontologyBLASTP
18210041821903900transcriptional regulator LysR familyQuickGO ontologyBLASTP
182205718230821026molybdopterin binding domainQuickGO ontologyBLASTP
18230971823588492molybdenum cofactor biosynthesis protein CQuickGO ontologyBLASTP