Pre_GI Gene

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Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:851671 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8516718529571287Citrate transporterQuickGO ontology
8530538551792127HydantoinaseoxoprolinaseQuickGO ontologyBLASTP
855418856191774transcriptional regulator GntR familyQuickGO ontologyBLASTP
8562688573621095phosphomannose isomerase-like proteinQuickGO ontologyBLASTP
857904858521618transcriptional regulator TetR familyQuickGO ontologyBLASTP
858547859488942hypothetical proteinBLASTP
859616860446831hypothetical protein
860487861326840beta-lactamase domain proteinQuickGO ontologyBLASTP
8613198624341116Esteraselipase-like proteinQuickGO ontologyBLASTP
8624738647162244glycoside hydrolase family 3 domain proteinQuickGO ontologyBLASTP
8648768665461671ABC-type sugar transport system periplasmic component-like proteinQuickGO ontologyBLASTP
866795867769975binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
867787868674888binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
8687598714522694hypothetical proteinBLASTP
871581872183603transcriptional regulator TetR familyQuickGO ontologyBLASTP
873253873825573hypothetical protein
873964874098135UDP-glucose 4-epimerase-like proteinQuickGO ontologyBLASTP
874314874826513hypothetical proteinBLASTP
875177876115939Methyltransferase type 11QuickGO ontologyBLASTP
876268876849582putative transcriptional regulator TetR familyQuickGO ontologyBLASTP
876846877607762Abortive infection proteinQuickGO ontology
877705878502798transcriptional regulator AraC familyQuickGO ontologyBLASTP