Pre_GI Gene

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Host: NC_015275 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015275:3594890 Clostridium lentocellum DSM 5427 chromosome, complete genome

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
35948903595747858transcriptional regulator AraC familyQuickGO ontologyBLASTP
35957803596349570hypothetical proteinBLASTP
35966243597184561transcriptional regulator TetR familyQuickGO ontologyBLASTP
359722235996662445Beta-galactosidaseQuickGO ontologyBLASTP
359966636011291464hypothetical proteinBLASTP
360115136025631413sugar Glycoside-Pentoside-Hexuronide transporterQuickGO ontologyBLASTP
360258836049302343Alpha-galactosidaseQuickGO ontologyBLASTP
360532836068691542GMP synthase large subunitQuickGO ontologyBLASTP
360711936085731455inosine-5-monophosphate dehydrogenaseQuickGO ontologyBLASTP
36092663609778513hypothetical proteinBLASTP
36099863610825840Undecaprenyl-diphosphataseQuickGO ontologyBLASTP
361110236127361635chaperonin GroELQuickGO ontologyBLASTP
36128853613169285Chaperonin Cpn10QuickGO ontologyBLASTP
36134303614326897DNA-apurinic or apyrimidinic site lyaseQuickGO ontologyBLASTP
36147263615490765hypothetical protein
361562436166461023hypothetical proteinBLASTP
361678836178641077hypothetical proteinBLASTP
361829536194791185transposase IS204IS1001IS1096IS1165 family proteinQuickGO ontologyBLASTP
3619605361967773tRNA-ThrQuickGO ontologyBLASTP
3619682361975574tRNA-ArgQuickGO ontologyBLASTP
3619806361987974tRNA-ArgQuickGO ontologyBLASTP
3619907361999084tRNA-LeuQuickGO ontology
3619994362006976tRNA-ValQuickGO ontologyBLASTP
3620117362019074tRNA-AspQuickGO ontologyBLASTP
3620313362038573tRNA-ThrQuickGO ontologyBLASTP
3620400362047172tRNA-GluQuickGO ontology
3623830362390273tRNA-AlaQuickGO ontologyBLASTP
3625911362599989tRNA-SerQuickGO ontologyBLASTP
362638636270846992-C-methyl-D-erythritol 4-phosphate cytidylyltransferaseQuickGO ontologyBLASTP
362726536285871323amino acid permease-associated regionQuickGO ontologyBLASTP
36288883629253366VanZ family proteinQuickGO ontology
362971036307651056PilT protein domain proteinQuickGO ontologyBLASTP
363078736318031017metalloendopeptidase glycoprotease familyQuickGO ontologyBLASTP
36318243632411588hypothetical proteinBLASTP
36324283633339912ribonuclease ZQuickGO ontologyBLASTP
36335073633731225FeoA family proteinQuickGO ontologyBLASTP
363387536358872013ferrous iron transport protein BQuickGO ontologyBLASTP