Pre_GI Gene

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Host: NC_011898 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011898:3159411 Clostridium cellulolyticum H10, complete genome

Host Lineage: Clostridium cellulolyticum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: A non-ruminal mesophilic cellulolytic bacterium originally isolated from decayed grass compost. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Clostridium cellulolyticum is a mesophilic cellulolytic bacterium. Cellulose-degradation by C. cellulolyticum has been extensively studied. The cellulolytic enzymes of this organism are bound to a protein scaffold in an extracellular multienzyme complex called a cellulosome.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
31594113160088678hypothetical protein
31603273160665339hypothetical proteinBLASTP
31606593161015357IS66 Orf2 family proteinQuickGO ontologyBLASTP
316109131626801590transposase IS66QuickGO ontologyBLASTP
31632653164101837hypothetical protein
31641163164901786hypothetical protein
31648943165781888hypothetical protein
31658933166276384hypothetical protein
316655231717625211hypothetical proteinBLASTP
317177931732061428S-layer domain proteinQuickGO ontologyBLASTP
31737733174609837hypothetical protein
31745993175111513RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
317530031767601461methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
31770983177919822transcriptional regulator MerR familyQuickGO ontologyBLASTP
317954931808201272signal transduction histidine kinase regulating citratemalate metabolismQuickGO ontologyBLASTP
318100531836742670Ig domain protein group 2 domain proteinQuickGO ontologyBLASTP
318381231852001389peptidase S8 and S53 subtilisin kexin sedolisinQuickGO ontologyBLASTP
318526031917966537cell wallsurface repeat proteinQuickGO ontologyBLASTP
31919103192248339hypothetical protein
31924103193168759two component transcriptional regulator LytTR familyQuickGO ontologyBLASTP
319316531944451281signal transduction histidine kinase regulating citratemalate metabolismQuickGO ontologyBLASTP
31945973195025429hypothetical protein
31950063195896891hypothetical proteinBLASTP
31963003197220921transglutaminase domain proteinQuickGO ontologyBLASTP
31974473197986540hypothetical proteinBLASTP
31981023198431330hypothetical protein
319841631997681353AmidaseQuickGO ontologyBLASTP
31998193200712894transcriptional regulator AraC familyQuickGO ontologyBLASTP
320092532028771953hypothetical proteinBLASTP
320341532045031089histidine kinaseQuickGO ontologyBLASTP
32044933205197705two component transcriptional regulator winged helix familyQuickGO ontologyBLASTP