Pre_GI Gene

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Host: NC_009438 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009438:236424 Shewanella putrefaciens CN-32 chromosome, complete genome

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
236424237026603phage integrase family proteinQuickGO ontologyBLASTP
2372692383001032IS630 orfQuickGO ontologyBLASTP
238827239708882helix-turn-helix domain-containing proteinQuickGO ontologyBLASTP
239957240364408MerR family transcriptional regulatorQuickGO ontologyBLASTP
240460241356897cation efflux system permeaseQuickGO ontologyBLASTP
241360241872513lipoprotein signal peptidaseQuickGO ontologyBLASTP
2418942431831290transposase IS204IS1001IS1096IS1165 family proteinQuickGO ontologyBLASTP
243253243663411hypothetical proteinBLASTP
2437292468513123CzcA family heavy metal efflux proteinQuickGO ontologyBLASTP
2468612479071047biotinlipoyl attachment domain-containing proteinQuickGO ontologyBLASTP
2479862492301245outer membrane efflux proteinQuickGO ontologyBLASTP
249282249647366hypothetical protein
249734250639906cation efflux system permeaseQuickGO ontologyBLASTP
250662251126465MerR family transcriptional regulatorQuickGO ontologyBLASTP
251158252066909cation diffusion facilitator family transporterQuickGO ontologyBLASTP
252041252394354hypothetical proteinBLASTP
252538252927390hypothetical protein
252957253367411hypothetical protein
253541254446906hypothetical proteinBLASTP
254455254817363hypothetical proteinBLASTP
254905255900996phage integrase family proteinQuickGO ontologyBLASTP
255998256582585hypothetical protein
256659257336678hypothetical protein