Pre_GI: BLASTP Hits

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Query: NC_009438:236424:246861 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 246861, End: 247907, Length: 1047

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018697:1343756:1387224138722413882311008Cycloclasticus sp. P1 chromosome, complete genomeBiotin/lipoyl attachment domain-containing protein3e-78292
NC_015554:1653614:165641616564161657363948Alteromonas sp. SN2 chromosome, complete genomebiotin/lipoyl attachment2e-49196
NC_018679:278250:2782502782502794311182Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeHelB protein1e-47190
NC_007520:2305610:2319496231949623207431248Thiomicrospira crunogena XCL-2, complete genomeSecretion protein HlyD5e-41168
NC_009720:4406991:440825944082594409248990Xanthobacter autotrophicus Py2, complete genomeRND family efflux transporter MFP subunit3e-38159
NC_011138:318168:3330913330913343291239Alteromonas macleodii 'Deep ecotype', complete genomeSecretion protein HlyD3e-37156
NC_008345:4107847:410919341091934110119927Shewanella frigidimarina NCIMB 400, complete genomeefflux transporter, RND family, MFP subunit5e-37155
NC_016147:1672482:1671260167126016724921233Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative cation efflux system protein4e-36152
NC_009720:670853:689181689181690170990Xanthobacter autotrophicus Py2, complete genomeRND family efflux transporter MFP subunit1e-35150
NC_018868:619113:642328642328643269942Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeRND family efflux transporter MFP subunit1e-34147
NC_010943:2465976:248586924858692486819951Stenotrophomonas maltophilia K279a, complete genomeputative cobalt-zinc-cadmium resistance protein3e-33142
NC_011004:2507566:253038025303802531375996Rhodopseudomonas palustris TIE-1, complete genomeefflux transporter, RND family, MFP subunit5e-33142
NC_007958:2370619:240183124018312402817987Rhodopseudomonas palustris BisB5, complete genomeSecretion protein HlyD1e-32140
NC_011004:2457778:248947324894732490465993Rhodopseudomonas palustris TIE-1, complete genomeefflux transporter, RND family, MFP subunit1e-32140
NC_009485:7626677:763238476323847633331948Bradyrhizobium sp. BTAi1 chromosome, complete genomecobalt-zinc-cadmium resistance efflux pump CzcB2e-30133
NC_007404:1388049:1410356141035614118671512Thiobacillus denitrificans ATCC 25259, complete genomeSecretion protein HlyD3e-24112
NC_013446:2820000:2834352283435228353681017Comamonas testosteroni CNB-2, complete genomeefflux transporter, RND family, MFP subunit4e-23109
NC_010002:1879220:1907453190745319088231371Delftia acidovorans SPH-1, complete genomeefflux transporter, RND family, MFP subunit1e-22107
NC_015222:523915:5430765430765445751500Nitrosomonas sp. AL212 chromosome, complete genomeefflux transporter, RND family, MFP subunit1e-22107
NC_009659:1984980:2002257200225720038371581Janthinobacterium sp. Marseille chromosome, complete genomecobalt-zinc-cadmium resistance protein CzcB3e-22106
NC_017986:2548720:2595574259557425968241251Pseudomonas putida ND6 chromosome, complete genomeRND family efflux transporter MFP subunit7e-22105
NC_009512:27783:6137561375626251251Pseudomonas putida F1, complete genomeefflux transporter, RND family, MFP subunit9e-22104
NC_002947:8394:4939949399506491251Pseudomonas putida KT2440, complete genomecobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family9e-22104
NC_010501:30000:6609166091673411251Pseudomonas putida W619, complete genomeefflux transporter, RND family, MFP subunit9e-22104
NC_010322:29983:6215762157634071251Pseudomonas putida GB-1 chromosome, complete genomeRND family efflux transporter MFP subunit5e-21102
NC_015733:5909821:5943165594316559444451281Pseudomonas putida S16 chromosome, complete genomeRND family efflux transporter, MFP subunit4e-21102
NC_003296:612000:6137526137526149661215Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE COBALT-ZINC-CADMIUM RESISTANCE (CATION EFFLUX SYSTEM PROTEIN) TRANSMEMBRANE9e-21101
NC_008782:1917634:1929468192946819310841617Acidovorax sp. JS42, complete genomeefflux transporter, RND family, MFP subunit3e-1996.3
NC_014323:5051041:5069403506940350705931191Herbaspirillum seropedicae SmR1 chromosome, complete genomecobalt-zinc-cadmium resistance cation efflux system transmembrane protein4e-1995.9
NC_012811:139498:1582481582481596121365Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative CzrB-like protein; cation efflux system protein6e-1995.1
NC_012968:1594954:1624912162491216264561545Methylotenera mobilis JLW8, complete genomeefflux transporter, RND family, MFP subunit9e-1994.7
NC_014910:242845:2499832499832515751593Alicycliphilus denitrificans BC chromosome, complete genomeefflux transporter, rnd family, mfp subunit1e-1894
NC_009439:1297851:1324725132472513259901266Pseudomonas mendocina ymp, complete genomeRND family efflux transporter MFP subunit3e-1893.2
NC_009434:3611738:3698472369847236997791308Pseudomonas stutzeri A1501, complete genomeCzcB family cobalt/zinc/cadmium efflux transporter membrane fusion protein3e-1789.7
NC_009138:519965:5245815245815261611581Herminiimonas arsenicoxydans, complete genomeCobalt-zinc-cadmium resistance protein czcB (Cation efflux system protein czcB)3e-1789.4
NC_015740:1291739:1304881130488113061881308Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeCzcB family cobalt/zinc/cadmium efflux transporter membrane fusion protein7e-1788.6
NC_015422:3513689:3535262353526235368631602Alicycliphilus denitrificans K601 chromosome, complete genomeRND family efflux transporter MFP subunit3e-1686.3
NC_006368:2684358:269439426943942695362969Legionella pneumophila str. Paris, complete genomeChemiosmotic efflux system C protein B6e-1685.5
NC_012982:711122:7604227604227617291308Hirschia baltica ATCC 49814, complete genomeefflux transporter, RND family, MFP subunit7e-1685.1
NC_013960:1693643:1710722171072217120141293Nitrosococcus halophilus Nc4 chromosome, complete genomeefflux transporter, RND family, MFP subunit1e-1584.3
NC_009138:1583988:1588974158897415905481575Herminiimonas arsenicoxydans, complete genomeCobalt-zinc-cadmium resistance protein czcB (Cation efflux system protein czcB)2e-1584
NC_002942:1109618:112685611268561127824969Legionella pneumophila subsp. pneumophila str. Philadelphia 1,chemiosmotic efflux system C protein B2e-1583.2
NC_008347:2515921:2549944254994425513231380Maricaulis maris MCS10, complete genomeefflux transporter, RND family, MFP subunit6e-1582
NC_008347:2515921:2532218253221825334171200Maricaulis maris MCS10, complete genomeefflux transporter, RND family, MFP subunit1e-1377.4
NC_002939:2337402:2353324235332423545801257Geobacter sulfurreducens PCA, complete genomeheavy metal efflux pump, CzcB family4e-1375.9
NC_002939:2315402:2353324235332423545801257Geobacter sulfurreducens PCA, complete genomeheavy metal efflux pump, CzcB family4e-1375.9
NC_011146:2200142:2241568224156822428541287Geobacter bemidjiensis Bem, complete genomeefflux transporter, RND family, MFP subunit8e-1375.1
NC_008571:1374496:1381429138142913832791851Gramella forsetii KT0803, complete genomeHlyD family secretion protein2e-1273.9
NC_008752:2724977:2741757274175727430071251Acidovorax avenae subsp. citrulli AAC00-1, complete genomeefflux transporter, RND family, MFP subunit3e-1272.8
NC_010170:4800000:4866928486692848680911164Bordetella petrii, complete genomeCobalt-zinc-cadmium resistance protein czcB1e-1067.8
NC_014366:588347:5994035994036006111209Gamma proteobacterium HdN1, complete genomeHlyD family secretion protein4e-0962.4
NC_016024:275845:2758452758452772601416Candidatus Chloracidobacterium thermophilum B chromosome chromosomeRND family efflux transporter MFP subunit2e-0860.1
NC_016147:623666:6442566442566455091254Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative HlyD family secretion protein6e-0858.9
NC_013446:2820000:2856887285688728584071521Comamonas testosteroni CNB-2, complete genomeefflux transporter, RND family, MFP subunit8e-0755.1
NC_015167:3652015:3670956367095636721611206Cellulophaga lytica DSM 7489 chromosome, complete genomeRND family efflux transporter MFP subunit1e-0654.7
NC_007484:1694738:1705899170589917077761878Nitrosococcus oceani ATCC 19707, complete genomeSecretion protein HlyD1e-0654.3
NC_009659:1923925:1959605195960519607951191Janthinobacterium sp. Marseille chromosome, complete genomecobalt-zinc-cadmium resistance protein CzcB1e-0654.3
NC_009434:3611738:3640157364015736417941638Pseudomonas stutzeri A1501, complete genomeCzcB family heavy metal RND efflux membrane fusion protein1e-0654.3
NC_008781:2981868:2980651298065129818711221Polaromonas naphthalenivorans CJ2, complete genomeefflux transporter, RND family, MFP subunit2e-0653.9
NC_007484:1694738:1693338169333816947411404Nitrosococcus oceani ATCC 19707, complete genomeSecretion protein HlyD4e-0652.8
NC_007484:1671835:1693338169333816947411404Nitrosococcus oceani ATCC 19707, complete genomeSecretion protein HlyD4e-0652.8
NC_008609:1976403:2069205206920520703561152Pelobacter propionicus DSM 2379, complete genomeefflux transporter, RND family, MFP subunit4e-0652.8
NC_015726:2177783:2176242217624221777861545Cupriavidus necator N-1 chromosome 1, complete sequencecobalt-zinc-cadmium resistance membrane-fusion protein CzcA4e-0652.4
NC_020156:737063:7750677750677768001734Nonlabens dokdonensis DSW-6, complete genomeputative cation efflux system transmembrane protein5e-0652.4
NC_014315:1744485:1751756175175617536331878Nitrosococcus watsoni C-113 chromosome, complete genomeRND family efflux transporter MFP subunit7e-0652
NC_007298:1759881:1798600179860017997901191Dechloromonas aromatica RCB, complete genomeSecretion protein HlyD9e-0651.6