Pre_GI: BLASTP Hits

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Query: NC_009438:236424:252041 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 252041, End: 252394, Length: 354

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007947:485828:503294503294503620327Methylobacillus flagellatus KT, complete genomeprotein of unknown function UPF00604e-30129
NC_017506:1507943:150907415090741509406333Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein5e-29126
NC_008782:1510000:153120015312001531535336Acidovorax sp. JS42, complete genomeprotein of unknown function UPF00606e-23105
NC_015731:990000:997173997173997517345Nitrosomonas sp. Is79A3 chromosome, complete genomehypothetical protein8e-23105
NC_016614:1178000:117938411793841179716333Vibrio sp. EJY3 chromosome 2, complete sequencehypothetical protein4e-2199.8
NC_014623:4535544:456529245652924565624333Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein1e-1995.1
NC_009800:1657550:167748216774821677808327Escherichia coli HS, complete genomehypothetical protein1e-1685.1
NC_011283:2836000:291661729166172916943327Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein3e-1684
NC_013850:2846069:287898528789852879311327Klebsiella variicola At-22 chromosome, complete genomeprotein of unknown function UPF00603e-1684
NC_014910:2779573:278695927869592787291333Alicycliphilus denitrificans BC chromosome, complete genomehypothetical protein2e-1270.9
NC_010804:996837:104031310403131040648336Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein2e-1167.4
NC_010084:2484000:248412524841252484460336Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein2e-1167.4
NC_007626:3522265:353276335327633533089327Magnetospirillum magneticum AMB-1, complete genomehypothetical protein4e-1063.5
NC_013960:1693643:170977417097741710097324Nitrosococcus halophilus Nc4 chromosome, complete genomeprotein of unknown function UPF00601e-0962
NC_021182:1245692:126336912633691263704336Clostridium pasteurianum BC1, complete genomehypothetical protein3e-0960.5
NC_010602:2244729:233287723328772333224348Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'hypothetical protein6e-0753.1
NC_010842:2310756:233826423382642338611348Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomehypothetical protein6e-0753.1
NC_014507:2034000:204321620432162043599384Methanoplanus petrolearius DSM 11571 chromosome, complete genomehypothetical protein8e-0752.4
NC_007907:5185510:525793552579355258261327Desulfitobacterium hafniense Y51, complete genomehypothetical protein8e-0648.9
NC_014666:4547873:455633345563334556665333Frankia sp. EuI1c chromosome, complete genomeprotein of unknown function UPF00601e-0548.9