Pre_GI: BLASTP Hits

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Query: NC_009438:236424:240460 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 240460, End: 241356, Length: 897

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009438:212476:217342217342218238897Shewanella putrefaciens CN-32 chromosome, complete genomecation efflux system permease6e-161566
NC_008750:450233:454902454902455798897Shewanella sp. W3-18-1, complete genomecation efflux system permease, putative6e-161566
NC_007951:3655088:367337336733733674269897Burkholderia xenovorans LB400 chromosome 1, complete sequenceheavy metal efflux pump, CDF family9e-159559
NC_007952:1587500:159737215973721598268897Burkholderia xenovorans LB400 chromosome 2, complete sequenceheavy metal/H+ antiporter, CDF family9e-159559
NC_007951:3655088:366197636619763662872897Burkholderia xenovorans LB400 chromosome 1, complete sequenceheavy metal efflux pump, CDF family9e-159559
NC_007951:1711223:172257317225731723469897Burkholderia xenovorans LB400 chromosome 1, complete sequenceheavy metal/H+ antiporter, CDF family9e-159559
NC_014836:2919508:135811358114477897Desulfurispirillum indicum S5 chromosome, complete genomecation efflux protein2e-156551
NC_014836:2919508:645764577353897Desulfurispirillum indicum S5 chromosome, complete genomecation efflux protein6e-156550
NC_011901:491783:502059502059502955897Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeCDF family heavy metal/H(+) antiporter9e-154542
NC_011586:268927:319758319758320654897Acinetobacter baumannii AB0057 chromosome, complete genomeheavy metal detoxification protein8e-151533
NC_010410:3606826:368246936824693683365897Acinetobacter baumannii AYE, complete genomeputative Heavy metal transport/detoxification protein8e-151533
NC_010611:240839:257496257496258392897Acinetobacter baumannii ACICU, complete genomeHeavy metal detoxification protein8e-151533
NC_010410:3606826:361593836159383616834897Acinetobacter baumannii AYE, complete genomeputative heavy metal transport/detoxification protein8e-151533
NC_009434:3611738:369013436901343691024891Pseudomonas stutzeri A1501, complete genomeCo/Zn/Cd efflux system component9e-120429
NC_015740:2998500:300797130079713008726756Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completecation efflux system permease1e-113409
NC_008740:3520500:355354035535403554436897Marinobacter aquaeolei VT8, complete genomeheavy metal/H+ antiporter, CDF family3e-106384
NC_017506:93494:9966399663100559897Marinobacter adhaerens HP15 chromosome, complete genomecation efflux system protein1e-101369
NC_008740:3602367:361510936151093616005897Marinobacter aquaeolei VT8, complete genomeheavy metal/H+ antiporter, CDF family3e-99361
NC_018697:1343756:138347813834781384374897Cycloclasticus sp. P1 chromosome, complete genomeCation efflux system permease2e-81301
NC_009438:236424:249734249734250639906Shewanella putrefaciens CN-32 chromosome, complete genomecation efflux system permease5e-77287
NC_015144:124500:141959141959142753795Weeksella virosa DSM 16922 chromosome, complete genomecation efflux protein4e-53208
NC_015177:1822000:182213318221331822927795Pedobacter saltans DSM 12145 chromosome, complete genomecation efflux protein1e-52207
NC_014655:570000:588388588388589182795Leadbetterella byssophila DSM 17132 chromosome, complete genomecation efflux protein2e-52206
NC_014759:2438492:244244024424402443234795Marivirga tractuosa DSM 4126 chromosome, complete genomecation efflux protein5e-50197
NC_014221:38000:448204482045608789Truepera radiovictrix DSM 17093 chromosome, complete genomecation efflux protein2e-49196
NC_020156:737063:784063784063784824762Nonlabens dokdonensis DSW-6, complete genomeCDF family cation efflux protein7e-48191
NC_014041:4335948:433976043397604340560801Zunongwangia profunda SM-A87 chromosome, complete genomeintegral membrane protein2e-47189
NC_017045:1:307030703837768Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,Co/Zn/Cd efflux system protein2e-46186
NC_015638:328601:336083336083336874792Lacinutrix sp. 5H-3-7-4 chromosome, complete genomecation efflux protein8e-46184
NC_008228:2450700:246767124676712468306636Pseudoalteromonas atlantica T6c, complete genomecation efflux protein3e-44179
NC_013440:3870697:388950238895023890311810Haliangium ochraceum DSM 14365, complete genomecation efflux protein3e-44178
NC_009439:1297851:130871213087121309512801Pseudomonas mendocina ymp, complete genomecation diffusion facilitator family transporter9e-26117
NC_018868:619113:639870639870640424555Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeCo/Zn/Cd efflux system protein1e-22107
NC_017506:93494:939259392594650726Marinobacter adhaerens HP15 chromosome, complete genomecation efflux protein3e-22105
NC_011992:2279752:229620522962052296828624Acidovorax ebreus TPSY, complete genomecation efflux protein3e-22105
NC_013959:826868:860177860177860797621Sideroxydans lithotrophicus ES-1 chromosome, complete genomecation efflux protein3e-22105
NC_016147:623666:638535638535639152618Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative transmembrane protein1e-21103
NC_007484:1694738:170199517019951702672678Nitrosococcus oceani ATCC 19707, complete genomeCation efflux protein2e-20100
NC_014315:1744485:176055617605561761227672Nitrosococcus watsoni C-113 chromosome, complete genomecation efflux protein1e-20100
NC_011206:2040000:205738520573852058011627Acidithiobacillus ferrooxidans ATCC 53993, complete genomecation efflux protein9e-21100
NC_011761:2131911:216934321693432169969627Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completecation efflux permease9e-21100
NC_012982:711122:767090767090767734645Hirschia baltica ATCC 49814, complete genomecation efflux protein9e-2097.8
NC_020911:3475096:347676834767683477472705Octadecabacter antarcticus 307, complete genomeputative cobalt-zinc-cadmium resistance protein czcD2e-1893.2
NC_008347:2515921:254243925424392543074636Maricaulis maris MCS10, complete genomecation efflux protein6e-1891.7
NC_014010:1020488:105797310579731058608636Candidatus Puniceispirillum marinum IMCC1322 chromosome, completecation efflux protein7e-1891.3
NC_010170:4800000:485695548569554857566612Bordetella petrii, complete genomeZinc transporter8e-1891.3
NC_012968:1594954:162112316211231621740618Methylotenera mobilis JLW8, complete genomecation efflux protein1e-1687.4
NC_008786:3323167:333059233305923331260669Verminephrobacter eiseniae EF01-2, complete genomecation efflux protein1e-1687.4
NC_010519:1963256:198360419836041984218615Haemophilus somnus 2336 chromosome, complete genomecation efflux protein4e-1479
NC_015684:2000771:200720420072042007938735Oligotropha carboxidovorans OM5 chromosome, complete genomehypothetical protein2e-1170.1
NC_009138:519965:5199655199655221932229Herminiimonas arsenicoxydans, complete genomePutative metal-transporting P-type ATPase3e-1169.3
NC_013446:2820000:2821488282148828243312844Comamonas testosteroni CNB-2, complete genomeheavy metal translocating P-type ATPase6e-1168.2
NC_007164:2046937:204917320491732049787615Corynebacterium jeikeium K411, complete genomeputative Co/Zn/Cd efflux system component2e-1067
NC_009138:1518315:1531700153170015340812382Herminiimonas arsenicoxydans, complete genomeputative toxic metal efflux pump3e-0756.2
NC_008573:195317:2109952109952134002406Shewanella sp. ANA-3 plasmid 1, complete sequence4e-0755.8
NC_006625:63342:8306683066854532388Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceheavy metal translocating P-type ATPase4e-0755.8
NC_008345:4107847:4116070411607041184752406Shewanella frigidimarina NCIMB 400, complete genomeheavy metal translocating P-type ATPase3e-0755.8
NC_011666:1601983:162099316209931621337345Methylocella silvestris BL2, complete genome1e-0654.3
NC_002927:2636694:2656511265651126588472337Bordetella bronchiseptica RB50, complete genomeputative membrane transport ATPase1e-0653.9
NC_011662:2374955:2377507237750723799092403Thauera sp. MZ1T, complete genomeheavy metal translocating P-type ATPase2e-0653.5
NC_008782:1308007:1319914131991413223132400Acidovorax sp. JS42, complete genomeheavy metal translocating P-type ATPase2e-0653.1