Pre_GI: BLASTP Hits

Some Help

Query: NC_006905:2235607:2262779 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 2262779, End: 2263579, Length: 801

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:2179688:220584422058442206644801Salmonella enterica subsp. enterica serovar Typhi str. CT18,phosphomethylpyrimidine kinase2e-145515
NC_011149:2179592:220585122058512206651801Salmonella enterica subsp. enterica serovar Agona str. SL483,phosphomethylpyrimidine kinase2e-145515
NC_009792:642881:656445656445657245801Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein7e-135479
NC_002655:2925787:292746829274682928268801Escherichia coli O157:H7 EDL933, complete genomephosphomethylpyrimidine kinase2e-134478
NC_002695:2854629:285724928572492858049801Escherichia coli O157:H7 str. Sakai, complete genomephosphomethylpyrimidine kinase2e-134478
NC_011353:2852362:285404328540432854843801Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephosphomethylpyrimidine kinase2e-134478
NC_013008:2851342:285302328530232853823801Escherichia coli O157:H7 str. TW14359 chromosome, complete genomephosphomethylpyrimidine kinase2e-134478
CU928160:2239637:224325822432582244058801Escherichia coli IAI1 chromosome, complete genomebifunctional hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase4e-134477
NC_007384:2251792:225541322554132256213801Shigella sonnei Ss046, complete genomephosphomethylpyrimidine kinase4e-134477
NC_000913:2180855:218173821817382182538801Escherichia coli K12, complete genomephosphomethylpyrimidine kinase4e-134477
NC_010473:2267851:227274622727462273546801Escherichia coli str. K-12 substr. DH10B, complete genomebifunctional hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase4e-134477
CP002185:2347413:235230823523082353108801Escherichia coli W, complete genomebifunctional hydroxy-methylpyrimidine kinase/hydroxy-phosphomethylpyrimidine kinase4e-134477
NC_010468:1694729:171048117104811711281801Escherichia coli ATCC 8739, complete genomephosphomethylpyrimidine kinase4e-134477
NC_009800:2225182:222606522260652226865801Escherichia coli HS, complete genomephosphomethylpyrimidine kinase4e-134477
AC_000091:2185369:218705021870502187850801Escherichia coli W3110 DNA, complete genomebifunctional hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase4e-134477
NC_011741:2239637:224325822432582244058801Escherichia coli IAI1 chromosome, complete genomephosphomethylpyrimidine kinase4e-134477
NC_012759:2069326:207422120742212075021801Escherichia coli BW2952 chromosome, complete genomephosphomethylpyrimidine kinase4e-134477
NC_016822:2341127:234474823447482345548801Shigella sonnei 53G, complete genomebifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase4e-134477
NC_004337:2185282:218923921892392190039801Shigella flexneri 2a str. 301, complete genomephosphomethylpyrimidine kinase8e-134476
NC_008258:2190635:219152121915212192321801Shigella flexneri 5 str. 8401, complete genomephosphomethylpyrimidine kinase8e-134476
NC_004741:2169877:217076321707632171563801Shigella flexneri 2a str. 2457T, complete genomephosphomethylpyrimidine kinase8e-134476
NC_017328:2225418:223012922301292230929801Shigella flexneri 2002017 chromosome, complete genomePhosphomethylpyrimidine kinase8e-134476
NC_011750:955451:971765971765972565801Escherichia coli IAI39 chromosome, complete genomephosphomethylpyrimidine kinase2e-133474
NC_011745:2399313:240293424029342403734801Escherichia coli ED1a chromosome, complete genomephosphomethylpyrimidine kinase5e-133473
NC_011740:2220251:223482222348222235622801Escherichia fergusonii ATCC 35469, complete genomebifunctional hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase2e-131468
NC_012731:3593000:359420435942043595004801Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomephosphomethylpyrimidine kinase3e-130464
NC_014121:3483976:348927234892723490072801Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completephosphomethylpyrimidine kinase1e-128459
NC_015968:3053565:307028630702863071086801Enterobacter asburiae LF7a chromosome, complete genomephosphomethylpyrimidine kinase2e-123442
NC_013421:1397841:141174114117411412544804Pectobacterium wasabiae WPP163, complete genomephosphomethylpyrimidine kinase8e-114409
NC_010634:3250810:325717532571753257975801Yersinia pseudotuberculosis PB1/+, complete genomephosphomethylpyrimidine kinase5e-109394
NC_006155:3333303:333969133396913340491801Yersinia pseudotuberculosis IP 32953, complete genomephosphomethylpyrimidine kinase5e-109394
NC_014500:3519722:352100735210073521810804Dickeya dadantii 3937 chromosome, complete genomebifunctional hydroxy-methylpyrimidine kinase/hydroxy-phosphomethylpyrimidine kinase2e-108392
NC_008150:2574794:257969125796912580491801Yersinia pestis Antiqua, complete genomeputative phosphomethylpyrimidine kinase3e-108391
NC_004088:1510467:152310415231041523904801Yersinia pestis KIM, complete genomephosphomethylpyrimidine kinase3e-108391
NC_005810:3021913:302680930268093027609801Yersinia pestis biovar Microtus str. 91001, complete genomephosphomethylpyrimidine kinase3e-108391
NC_003143:3191246:319612331961233196923801Yersinia pestis CO92, complete genomephosphomethylpyrimidine kinase3e-108391
NC_008149:1440371:145302414530241453824801Yersinia pestis Nepal516, complete genomephosphomethylpyrimidine kinase3e-108391
NC_009381:2491427:249632324963232497123801Yersinia pestis Pestoides F chromosome, complete genomephosphomethylpyrimidine kinase3e-108391
NC_014029:3171627:318426431842643185064801Yersinia pestis Z176003 chromosome, complete genomephosphomethylpyrimidine kinase3e-108391
NC_017154:2876545:288136728813672882167801Yersinia pestis D106004 chromosome, complete genomephosphomethylpyrimidine kinase3e-108391
NC_017160:3094768:310923131092313110031801Yersinia pestis D182038 chromosome, complete genomephosphomethylpyrimidine kinase3e-108391
NC_017168:2535732:254060925406092541409801Yersinia pestis A1122 chromosome, complete genomebifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase3e-108391
NC_009708:1403434:141464314146431415443801Yersinia pseudotuberculosis IP 31758 chromosome, complete genomephosphomethylpyrimidine kinase2e-107388
NC_010465:1427170:145049514504951451295801Yersinia pseudotuberculosis YPIII, complete genomephosphomethylpyrimidine kinase2e-107388
NC_013592:3397304:339947033994703400273804Dickeya dadantii Ech586, complete genomephosphomethylpyrimidine kinase9e-105379
NC_012691:241404:244649244649245449801Tolumonas auensis DSM 9187, complete genomephosphomethylpyrimidine kinase4e-86317
NC_014210:723719:741282741282742085804Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,phosphomethylpyrimidine kinase1e-69262
NC_012489:4336790:4356351435635143578321482Gemmatimonas aurantiaca T-27, complete genomethiamine-phosphate pyrophosphorylase/phosphomethylpyrimidine kinase4e-64244
NC_010161:2548254:256908825690882569942855Bartonella tribocorum CIP 105476, complete genomephosphomethylpyrimidine kinase2e-62239
NC_015732:191554:192336192336193193858Spirochaeta caldaria DSM 7334 chromosome, complete genomephosphomethylpyrimidine kinase3e-57221
NC_013457:979102:994942994942995802861Vibrio sp. Ex25 chromosome 2, complete genomephosphomethylpyrimidine kinase4e-57221
NC_014364:773500:792257792257793105849Spirochaeta smaragdinae DSM 11293 chromosome, complete genomephosphomethylpyrimidine kinase4e-56218
NC_016048:2907702:293291329329132933722810Oscillibacter valericigenes Sjm18-20, complete genomephosphomethylpyrimidine kinase4e-56218
NC_020911:4428000:444667644466764447482807Octadecabacter antarcticus 307, complete genomephosphomethylpyrimidine kinase1e-55216
NC_016628:537137:567998567998568858861Vibrio furnissii NCTC 11218 chromosome 2, complete sequencephosphomethylpyrimidine kinase5e-55214
NC_020291:902635:920324920324921148825Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehydroxymethylpyrimidine/phosphomethylpyrimidine kinase ThiD2e-54212
NC_012108:481657:497063497063497881819Desulfobacterium autotrophicum HRM2, complete genomeputative bifunctional enzyme ThiED (Thiamine-phosphate pyrophosphorylase / Phosphomethylpyrimidine kinase)3e-54212
NC_018607:2472250:249139824913982492207810Brachyspira pilosicoli B2904 chromosome, complete genomephosphomethylpyrimidine kinase3e-54211
NC_014330:1685698:168642716864271687236810Brachyspira pilosicoli 95/1000 chromosome, complete genomephosphomethylpyrimidine kinase3e-54211
NC_018604:393338:393338393338394147810Brachyspira pilosicoli WesB complete genomephosphomethylpyrimidine kinase3e-54211
NC_019908:1565500:158353815835381584347810Brachyspira pilosicoli P43/6/78 chromosome, complete genomephosphomethylpyrimidine kinase7e-54210
NC_008593:1917118:192112919211291921932804Clostridium novyi NT, complete genomephosphomethylpyrimidine kinase1e-53210
NC_019815:679592:697638697638698471834Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiphosphomethylpyrimidine kinase4e-53207
NC_013517:1249466:125826912582691259087819Sebaldella termitidis ATCC 33386, complete genomephosphomethylpyrimidine kinase3e-52205
NC_010175:448020:471908471908472708801Chloroflexus aurantiacus J-10-fl, complete genomephosphomethylpyrimidine kinase1e-51203
NC_012032:448161:472050472050472850801Chloroflexus sp. Y-400-fl, complete genomephosphomethylpyrimidine kinase1e-51203
NC_013216:1748241:174824117482411749023783Desulfotomaculum acetoxidans DSM 771, complete genomephosphomethylpyrimidine kinase9e-52203
NC_020410:495184:530440530440531258819Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeHydroxymethylpyrimidine/phosphomethylpyrimidine kinase2e-51202
NC_015425:2144639:214737821473782148181804Clostridium botulinum BKT015925 chromosome, complete genomephosphomethylpyrimidine kinase2e-51202
NC_009725:496443:547847547847548665819Bacillus amyloliquefaciens FZB42, complete genomeputative phosphomethylpyrimidine kinase3e-51202
NC_012668:2258854:228787222878722288720849Vibrio cholerae MJ-1236 chromosome 1, complete sequencephosphomethylpyrimidine kinase1e-50200
NC_004193:375416:502878502878503672795Oceanobacillus iheyensis HTE831, complete genomephosphomethylpyrimidine kinase2e-48192
NC_015144:1453500:146986214698621470698837Weeksella virosa DSM 16922 chromosome, complete genomephosphomethylpyrimidine kinase2e-48192
NC_003295:112778:112778112778113683906Ralstonia solanacearum GMI1000, complete genomePROBABLE BIFUNCTIONAL PROTEIN: HYDROXY-PHOSPHOMETHYLPYRIMIDINE KINASE AND HYDROXY-METHYLPYRIMIDINE KINASE8e-47187
NC_005945:754517:759271759271760083813Bacillus anthracis str. Sterne, complete genomephosphomethylpyrimidine kinase3e-44178
NC_009664:1434974:143497414349741435813840Kineococcus radiotolerans SRS30216, complete genomephosphomethylpyrimidine kinase4e-43175
NC_010376:186510:238995238995239798804Finegoldia magna ATCC 29328, complete genomephosphomethylpyrimidine kinase4e-43174
NC_002578:1333827:133540713354071336198792Thermoplasma acidophilum DSM 1728, complete genomephosphomethylpyrimidine kinase7e-43174
NC_000918:1353310:137779513777951378562768Aquifex aeolicus VF5, complete genomeHMP-P kinase8e-43174
NC_006300:600516:630569630569631378810Mannheimia succiniciproducens MBEL55E, complete genomephosphomethylpyrimidine kinase1e-42172
NC_013174:1254874:1256387125638712579431557Jonesia denitrificans DSM 20603, complete genomephosphomethylpyrimidine kinase2e-42172
NC_009513:1065704:106570410657041066543840Lactobacillus reuteri F275, complete genomephosphomethylpyrimidine kinase4e-41168
NC_019896:2805098:282779528277952828610816Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein3e-40165
NC_008525:606986:614651614651615466816Pediococcus pentosaceus ATCC 25745, complete genomeHydroxymethylpyrimidine/phosphomethylpyrimidine kinase4e-38158
NC_017954:934616:9536239536239549781356Thermogladius cellulolyticus 1633 chromosome, complete genomephosphomethylpyrimidine kinase4e-38158
NC_014643:2056280:2057459205745920591021644Rothia dentocariosa ATCC 17931 chromosome, complete genomephosphomethylpyrimidine kinase6e-38157
NC_016790:31240:330323303233886855Corynebacterium diphtheriae VA01 chromosome, complete genomemultifunctional thiamine-phosphate pyrophosphorylase1e-37157
NC_003454:249304:253986253986254855870Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeHydroxymethylpyrimidine kinase4e-37154
NC_016070:743255:7432557432557446071353Thermoproteus tenax Kra 1, complete genomephosphomethylpyrimidine kinase fused to uncharacterized domain1e-36153
NC_020409:297258:3186893186893200591371Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completePhosphomethylpyrimidine kinase3e-36152
NC_016023:1501553:150724715072471508065819Bacillus coagulans 36D1 chromosome, complete genomephosphomethylpyrimidine kinase1e-35150
NC_014804:401313:4224084224084237571350Thermococcus barophilus MP chromosome, complete genomephosphomethylpyrimidine kinase9e-36150
NC_015634:2933712:294926129492612950079819Bacillus coagulans 2-6 chromosome, complete genomephosphomethylpyrimidine kinase8e-36150
NC_008278:6279553:629894562989456299820876Frankia alni ACN14a, complete genomebifunctional: hydroxy-methylpyrimidine kinase (HMP kinase); hydroxy-phosphomethylpyrimidine kinase (HMP-P kinase)9e-34144
NC_014844:2028666:2032446203244620338221377Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomephosphomethylpyrimidine kinase2e-33142
NC_008528:1265542:127215012721501272968819Oenococcus oeni PSU-1, complete genomeHydroxymethylpyrimidine/phosphomethylpyrimidine kinase2e-32139
NC_015697:256000:274536274536275351816Lactobacillus reuteri SD2112 chromosome, complete genomephosphomethylpyrimidine kinase3e-32139
NC_002677:363432:379127379127379966840Mycobacterium leprae TN, complete genomephosphomethylpyrimidine kinase1e-31137
NC_011896:363448:379143379143379982840Mycobacterium leprae Br4923, complete genomeputative phosphomethylpyrimidine kinase1e-31137
NC_013517:2413373:241641424164142417223810Sebaldella termitidis ATCC 33386, complete genomephosphomethylpyrimidine kinase6e-32137
NC_007955:2281070:2291633229163322930031371Methanococcoides burtonii DSM 6242, complete genomePhosphomethylpyrimidine kinase1e-30133
NC_013192:519600:522189522189523001813Leptotrichia buccalis DSM 1135, complete genomephosphomethylpyrimidine kinase6e-30131
NC_014507:982000:9997479997471000565819Methanoplanus petrolearius DSM 11571 chromosome, complete genomephosphomethylpyrimidine kinase7e-30130
NC_015680:369777:3705093705093718641356Pyrococcus yayanosii CH1 chromosome, complete genomephosphomethylpyrimidine kinase1e-29129
NC_018876:2628966:2657587265758726589391353Methanolobus psychrophilus R15 chromosome, complete genomephosphomethylpyrimidine kinase2e-29129
NC_015435:1713051:1720292172029217215031212Metallosphaera cuprina Ar-4 chromosome, complete genomephosphomethylpyrimidine kinase3e-29128
NC_009802:1977596:198045319804531981187735Campylobacter concisus 13826, complete genomephosphomethylpyrimidine kinase superfamily7e-29127
NC_008942:815280:828147828147828947801Methanocorpusculum labreanum Z, complete genomehypothetical protein1e-28126
NC_016052:2274427:228780222878022288638837Tetragenococcus halophilus NBRC 12172, complete genomepyridoxal kinase2e-28125
NC_002977:652481:666613666613667485873Methylococcus capsulatus str. Bath, complete genomephosphomethylpyrimidine kinase, putative2e-28125
NC_014160:719408:739405739405740277873Thermosphaera aggregans DSM 11486 chromosome, complete genomephosphomethylpyrimidine kinase5e-28124
NC_015587:215433:256614256614257393780Hydrogenobaculum sp. SHO chromosome, complete genomePhosphomethylpyrimidine kinase6e-28124
NC_015557:215397:256578256578257357780Hydrogenobaculum sp. 3684 chromosome, complete genomePhosphomethylpyrimidine kinase6e-28124
NC_020411:215432:256611256611257390780Hydrogenobaculum sp. HO, complete genomePhosphomethylpyrimidine kinase6e-28124
NC_009138:2242470:226103722610372261828792Herminiimonas arsenicoxydans, complete genomebifunctional protein: Includes: hydroxy-methylpyrimidine kinase (HMP kinase); hydroxy-phosphomethylpyrimidine kinase (HMP-P kinase)5e-27121
NC_004668:191732:195887195887196711825Enterococcus faecalis V583, complete genomephosphomethylpyrimidine kinase, putative2e-26119
NC_017316:157254:160854160854161678825Enterococcus faecalis OG1RF chromosome, complete genomephosphomethylpyrimidine kinase2e-26119
NC_020995:245671:251482251482252312831Enterococcus casseliflavus EC20, complete genomephosphomethylpyrimidine kinase1e-26119
NC_012704:1979183:1997235199723519983801146Corynebacterium kroppenstedtii DSM 44385, complete genomephosphomethylpyrimidine kinase1e-24114
NC_003450:3266604:328739132873913288191801Corynebacterium glutamicum ATCC 13032, complete genomephosphomethylpyrimidine kinase2e-24112
NC_015942:3185193:319063331906333191475843Acidithiobacillus ferrivorans SS3 chromosome, complete genomephosphomethylpyrimidine kinase type-12e-24112
NC_016516:1799521:180798918079891808792804Propionibacterium acnes TypeIA2 P.acn33 chromosome, completebifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase2e-23109
NC_016512:1810625:181653318165331817336804Propionibacterium acnes TypeIA2 P.acn17 chromosome, completebifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase2e-23109
NC_016511:1811171:181707918170791817882804Propionibacterium acnes TypeIA2 P.acn31 chromosome, completebifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase2e-23109
NC_014039:1813205:181914918191491819952804Propionibacterium acnes SK137 chromosome, complete genomeputative phosphomethylpyrimidine kinase3e-23108
NC_006085:1859191:186509918650991866004906Propionibacterium acnes KPA171202, complete genomephosphomethylpyrimidine kinase3e-23108
NC_015638:1824794:185619318561931856972780Lacinutrix sp. 5H-3-7-4 chromosome, complete genomephosphomethylpyrimidine kinase3e-2099
NC_015760:123929:131430131430132191762Streptococcus salivarius CCHSS3, complete genomephosphomethylpyrimidine kinase7e-2097.8
NC_006448:121435:127439127439128200762Streptococcus thermophilus LMG 18311, complete genomephosphomethylpyrimidine kinase1e-1997.1
NC_006449:121462:127466127466128227762Streptococcus thermophilus CNRZ1066, complete genomephosphomethylpyrimidine kinase1e-1997.1
NC_003450:3266604:328234532823453282947603Corynebacterium glutamicum ATCC 13032, complete genomehydroxymethylpyrimidine/phosphomethylpyrimidine kinase8e-0754.3
NC_006958:3240019:325565232556523256122471Corynebacterium glutamicum ATCC 13032, complete genomePUTATIVE PHOSPHOMETHYLPYRIMIDINE KINASE (C-terminal fragment)1e-0653.9