Pre_GI Gene

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Host: NC_013008 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013008:2851342 Escherichia coli O157:H7 str. TW14359 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli O157:H7 str. TW14359 was isolated from spinach during the E. coli outbreak in 2006. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
28504032851368966kinaseQuickGO ontologyBLASTP
28513422852088747DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
28521402852958819hydrolaseQuickGO ontologyBLASTP
28530232853823801phosphomethylpyrimidine kinaseQuickGO ontologyBLASTP
28538202854608789hydroxyethylthiazole kinaseQuickGO ontologyBLASTP
28549422855181240hypothetical proteinBLASTP
28557452855864120hypothetical proteinBLASTP
28562322856579348hypothetical proteinBLASTP
28565892856903315hypothetical proteinBLASTP
28570132857285273transcriptional repressor of rcnAQuickGO ontologyBLASTP
28574062858263858nickelcobalt efflux protein RcnAQuickGO ontologyBLASTP
28584812858819339hypothetical proteinBLASTP
285890128599351035fimbrial proteinQuickGO ontologyBLASTP
285994628624262481outer membrane proteinQuickGO ontologyBLASTP
28624422863164723periplasmic pilin chaperoneQuickGO ontologyBLASTP
28632042863746543fimbrial-like adhesin proteinQuickGO ontologyBLASTP
28640382864319282hypothetical proteinBLASTP
286458128656901110ATPaseQuickGO ontologyBLASTP
286582228678552034methionyl-tRNA synthetaseQuickGO ontologyBLASTP
28679962868724729regulatorQuickGO ontologyBLASTP
28695082869834327transposaseQuickGO ontologyBLASTP
28698312870721891transposaseQuickGO ontologyBLASTP