Pre_GI Gene

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Host: NC_011353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011353:2852362 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
28514232852388966kinase PfkB familyQuickGO ontologyBLASTP
28523622853108747GntR family transcriptional regulatorQuickGO ontologyBLASTP
28531602853978819glycosyl hydrolase family 25QuickGO ontologyBLASTP
28540432854843801phosphomethylpyrimidine kinaseQuickGO ontologyBLASTP
28548402855628789hydroxyethylthiazole kinaseQuickGO ontologyBLASTP
28560492856201153hypothetical proteinBLASTP
28574232857599177hypothetical proteinBLASTP
28576092857923315outer membrane proteinQuickGO ontologyBLASTP
28580332858305273transcriptional repressor RcnRQuickGO ontologyBLASTP
28584252859282858nickelcobalt efflux protein RcnAQuickGO ontologyBLASTP
28595002859838339hypothetical proteinBLASTP
285992028609541035type-1 fimbrial proteinQuickGO ontologyBLASTP
286096528634452481fimbrial usher proteinQuickGO ontologyBLASTP
28634612864135675gram-negative pilus assembly chaperoneQuickGO ontologyBLASTP
28642232864765543fimbrial proteinQuickGO ontologyBLASTP
28650572865218162hypothetical proteinBLASTP
286560028667091110ATPaseQuickGO ontologyBLASTP
286684128688742034methionyl-tRNA synthetaseQuickGO ontologyBLASTP
286993328728242892hypothetical proteinBLASTP