Pre_GI: BLASTN Hits

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Query: NC_011353:2852362 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Start: 2852362, End: 2872824, Length: 20463

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002655:2925787*2925787294624420458Escherichia coli O157:H7 EDL933, complete genome027440BLASTN svgBLASTP svg
NC_002695:2854629*2854629287509920471Escherichia coli O157:H7 str. Sakai, complete genome025650BLASTN svgBLASTP svg
NC_011750:955451*95545197876923319Escherichia coli IAI39 chromosome, complete genome08556BLASTN svgBLASTP svg
CU928160:2239637*2239637226345123815Escherichia coli IAI1 chromosome, complete genome06885BLASTN svgBLASTP svg
CP002185:2347413*2347413237250325091Escherichia coli W, complete genome06885BLASTN svgBLASTP svg
AC_000091:2185369*2185369220724521877Escherichia coli W3110 DNA, complete genome06797BLASTN svgBLASTP svg
NC_000913:2180855*2180855220193321079Escherichia coli K12, complete genome06797BLASTN svgBLASTP svg
NC_010473:2267851*2267851229294125091Escherichia coli str. K-12 substr. DH10B, complete genome06797BLASTN svgBLASTP svg
NC_007384:2251792*2251792227443422643Shigella sonnei Ss046, complete genome06788BLASTN svgBLASTP svg
NC_010468:1694729*1694729171759922871Escherichia coli ATCC 8739, complete genome06734BLASTN svgBLASTP svg
NC_008258:2190635*2190635221013919505Shigella flexneri 5 str. 8401, complete genome06734BLASTN svgBLASTP svg
NC_009800:2225182*2225182224625921078Escherichia coli HS, complete genome06726BLASTN svgBLASTP svg
NC_004337:2185282*2185282220846123180Shigella flexneri 2a str. 301, complete genome06718BLASTN svgBLASTP svg
NC_004741:2169877*2169877219012220246Shigella flexneri 2a str. 2457T, complete genome06718BLASTN svgBLASTP svg
NC_011740:2220251*2220251224611525865Escherichia fergusonii ATCC 35469, complete genome03523BLASTN svgBLASTP svg
NC_009792:64288164288166509922219Citrobacter koseri ATCC BAA-895, complete genome02125BLASTN svgBLASTP svg
NC_020260:1111130*1111130113509923970Cronobacter sakazakii Sp291, complete genome01754BLASTN svgBLASTP svg
NC_009778:10700001070000109309923100Enterobacter sakazakii ATCC BAA-894, complete genome01746BLASTN svgBLASTP svg
NC_011149:21795922179592220743527844Salmonella enterica subsp. enterica serovar Agona str. SL483,6e-121442BLASTN svgBLASTP svg
NC_003198:21796882179688220742827741Salmonella enterica subsp. enterica serovar Typhi str. CT18,4e-116426BLASTN svgBLASTP svg
NC_006905:22356072235607226436328757Salmonella enterica subsp. enterica serovar Choleraesuis str9e-114418BLASTN svgBLASTP svg
NC_014121:34839763483976350876424789Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-83317BLASTN svgBLASTP svg
NC_015968:30535653053565307621422650Enterobacter asburiae LF7a chromosome, complete genome6e-81309BLASTN svgBLASTP svg
NC_015566:16592881659288170119441907Serratia sp. AS12 chromosome, complete genome4e-73283BLASTN svgBLASTP svg
NC_014500:14916601491660151533923680Dickeya dadantii 3937 chromosome, complete genome1e-69272BLASTN svgBLASTP svg
NC_015061:19022511902251193341231162Rahnella sp. Y9602 chromosome, complete genome3e-52214BLASTN svgBLASTP svg
NC_013508:1289159*1289159133392244764Edwardsiella tarda EIB202, complete genome4e-48200BLASTN svgBLASTP svg
NC_014500:35197223519722353859918878Dickeya dadantii 3937 chromosome, complete genome5e-35157BLASTN svgBLASTP svg
NC_013421:13978411397841141728819448Pectobacterium wasabiae WPP163, complete genome1e-29139BLASTN svgBLASTP svg
NC_020260:440000*44000046819628197Cronobacter sakazakii Sp291, complete genome3e-24121BLASTN svgBLASTP svg
NC_007954:2440000*2440000246325523256Shewanella denitrificans OS217, complete genome1e-23119BLASTN svgBLASTP svg
NC_006300:1624254*1624254164509920846Mannheimia succiniciproducens MBEL55E, complete genome2e-22115BLASTN svgBLASTP svg
NC_013592:33973043397304341695019647Dickeya dadantii Ech586, complete genome5e-20107BLASTN svgBLASTP svg
NC_007712:16014991601499163292631428Sodalis glossinidius str. 'morsitans', complete genome2e-19105BLASTN svgBLASTP svg
NC_009053:393700*39370041964225943Actinobacillus pleuropneumoniae L20, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_009439:2427120*2427120248116354044Pseudomonas mendocina ymp, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008563:28713628713630584318708Escherichia coli APEC O1, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_010634:32508103250810326864117832Yersinia pseudotuberculosis PB1/+, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010465:14271701427170145224325074Yersinia pseudotuberculosis YPIII, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_006155:33333033333303335118117879Yersinia pseudotuberculosis IP 32953, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_003143:31912463191246321275521510Yersinia pestis CO92, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_004088:15104671510467153309222626Yersinia pestis KIM, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_005810:3021913*3021913304567123759Yersinia pestis biovar Microtus str. 91001, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_008149:14403711440371146301222642Yersinia pestis Nepal516, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_008150:25747942574794259632821535Yersinia pestis Antiqua, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_012691:24140424140426512723724Tolumonas auensis DSM 9187, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_003296:67379067379072609952310Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete2e-0971.9BLASTN svgBLASTP svg
NC_014315:2239725*2239725226027320549Nitrosococcus watsoni C-113 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg