Pre_GI Gene

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Host: NC_009800 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009800:2225182 Escherichia coli HS, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
22251822226000819glycosyl hydrolase family 25QuickGO ontologyBLASTP
22260652226865801phosphomethylpyrimidine kinaseQuickGO ontologyBLASTP
22268622227650789hydroxyethylthiazole kinaseQuickGO ontologyBLASTP
22278732228145273transcriptional repressor RcnRQuickGO ontologyBLASTP
22282662229090825nickelcobalt efflux protein RcnAQuickGO ontologyBLASTP
22291292229647519hypothetical proteinBLASTP
222972922307631035hypothetical proteinBLASTP
223077922332592481fimbrial usher proteinQuickGO ontologyBLASTP
22332752233949675gram-negative pilus assembly chaperoneQuickGO ontologyBLASTP
22340292234571543fimbrial proteinQuickGO ontologyBLASTP
223540822365171110mrp proteinQuickGO ontologyBLASTP
223664922386822034methionyl tRNA synthetaseQuickGO ontologyBLASTP
223882322426173795molybdate metabolism regulatorQuickGO ontologyBLASTP
224262722462593633molybdate metabolism regulator MolR homologQuickGO ontologyBLASTP