Pre_GI: BLASTN Hits

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Query: NC_010067:51000 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 51000, End: 74509, Length: 23510

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011083:30097603009760303011220353Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,06048BLASTN svgBLASTP svg
NC_011149:29122192912219296814855930Salmonella enterica subsp. enterica serovar Agona str. SL483,06046BLASTN svgBLASTP svg
NC_011080:29823462982346303624053895Salmonella enterica subsp. enterica serovar Newport str. SL254,06014BLASTN svgBLASTP svg
NC_010102:29674642967464302271055247Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,06001BLASTN svgBLASTP svg
NC_006905:29878632987863300811020248Salmonella enterica subsp. enterica serovar Choleraesuis str05991BLASTN svgBLASTP svg
NC_003197:3005842*3005842306162755786Salmonella typhimurium LT2, complete genome05985BLASTN svgBLASTP svg
NC_006511:28191282819128287100051873Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC05975BLASTN svgBLASTP svg
NC_004631:28721922872192289431722126Salmonella enterica subsp. enterica serovar Typhi Ty2, complete05935BLASTN svgBLASTP svg
NC_003198:28565962856596290597449379Salmonella enterica subsp. enterica serovar Typhi str. CT18,05935BLASTN svgBLASTP svg
NC_011750:4947500*4947500496714419645Escherichia coli IAI39 chromosome, complete genome01140BLASTN svgBLASTP svg
NC_010067:25297502529750259435464605Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete01070BLASTN svgBLASTP svg
NC_006511:44654954465495449196526471Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC01031BLASTN svgBLASTP svg
NC_010067:892729*89272992523832510Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete0930BLASTN svgBLASTP svg
NC_015663:770485*77048579596825484Enterobacter aerogenes KCTC 2190 chromosome, complete genome0791BLASTN svgBLASTP svg
NC_004631:4687270*4687270471022622957Salmonella enterica subsp. enterica serovar Typhi Ty2, complete0714BLASTN svgBLASTP svg
NC_003198:4676536*4676536471603539500Salmonella enterica subsp. enterica serovar Typhi str. CT18,0714BLASTN svgBLASTP svg
NC_009648:14876921487692151904531354Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome6e-177628BLASTN svgBLASTP svg
NC_010067:4418000*4418000444281924820Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete2e-176626BLASTN svgBLASTP svg
NC_015567:34650034650038359937100Serratia sp. AS9 chromosome, complete genome1e-147531BLASTN svgBLASTP svg
NC_015566:34508434508438359938516Serratia sp. AS12 chromosome, complete genome1e-147531BLASTN svgBLASTP svg
NC_013961:18910001891000191309922100Erwinia amylovora, complete genome1e-119438BLASTN svgBLASTP svg
CP002797:4603787*4603787464340739621Escherichia coli NA114, complete genome5e-97363BLASTN svgBLASTP svg
NC_011149:44740124474012449847024459Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-95357BLASTN svgBLASTP svg
NC_011149:1987291*1987291203423646946Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-77297BLASTN svgBLASTP svg
NC_015224:4386599*4386599441050923911Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,3e-74287BLASTN svgBLASTP svg
NC_015224:27019142701914272426222349Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-73285BLASTN svgBLASTP svg
NC_015224:2095816*2095816211873722922Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-72281BLASTN svgBLASTP svg
NC_015224:61080761080762877617970Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-72281BLASTN svgBLASTP svg
NC_015224:27903727903730366824632Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,3e-58234BLASTN svgBLASTP svg
NC_009801:30138383013838304465430817Escherichia coli E24377A, complete genome8e-50206BLASTN svgBLASTP svg
NC_008563:33321143332114335140519292Escherichia coli APEC O1, complete genome3e-46194BLASTN svgBLASTP svg
NC_007613:10380001038000106059922600Shigella boydii Sb227, complete genome7e-44186BLASTN svgBLASTP svg
NC_007608:970929709212311926028Shigella boydii Sb227 plasmid pSB4_227, complete sequence7e-44186BLASTN svgBLASTP svg
NC_007384:40950164095016412229027275Shigella sonnei Ss046, complete genome7e-44186BLASTN svgBLASTP svg
NC_004851:19170919170922249930791Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence7e-44186BLASTN svgBLASTP svg
NC_004741:4364235*4364235438964325409Shigella flexneri 2a str. 2457T, complete genome7e-44186BLASTN svgBLASTP svg
NC_004337:4374500*4374500439909924600Shigella flexneri 2a str. 301, complete genome7e-44186BLASTN svgBLASTP svg
NC_007613:34703143470314350909338780Shigella boydii Sb227, complete genome7e-44186BLASTN svgBLASTP svg
NC_007613:44030704403070442929526226Shigella boydii Sb227, complete genome7e-44186BLASTN svgBLASTP svg
NC_007613:76123476123478018918956Shigella boydii Sb227, complete genome7e-44186BLASTN svgBLASTP svg
NC_010660:33109331095109917991Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence7e-44186BLASTN svgBLASTP svg
NC_010658:2529033*2529033255581226780Shigella boydii CDC 3083-94, complete genome7e-44186BLASTN svgBLASTP svg
NC_008258:18738051873805189655222748Shigella flexneri 5 str. 8401, complete genome7e-44186BLASTN svgBLASTP svg
NC_008253:3941938*3941938399883856901Escherichia coli 536, complete genome7e-44186BLASTN svgBLASTP svg
NC_008253:3122148*3122148315923237085Escherichia coli 536, complete genome7e-44186BLASTN svgBLASTP svg
NC_008253:28285732828573285250723935Escherichia coli 536, complete genome7e-44186BLASTN svgBLASTP svg
NC_012779:2928000*2928000295428726288Edwardsiella ictaluri 93-146, complete genome2e-41178BLASTN svgBLASTP svg
NC_007606:12091321209132122967220541Shigella dysenteriae Sd197, complete genome4e-39170BLASTN svgBLASTP svg
NC_011740:28599332859933288499725065Escherichia fergusonii ATCC 35469, complete genome7e-38167BLASTN svgBLASTP svg
NC_010067:24881412488141251937331233Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete3e-37165BLASTN svgBLASTP svg
NC_014121:23304512330451236009929649Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete1e-36163BLASTN svgBLASTP svg
NC_014121:36275883627588367459947012Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete1e-36163BLASTN svgBLASTP svg
NC_014121:4299500*4299500433477235273Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete1e-36163BLASTN svgBLASTP svg
NC_014121:48950048950052159932100Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete1e-36163BLASTN svgBLASTP svg
NC_015963:11717811717814980332626Enterobacter asburiae LF7a plasmid pENTAS01, complete sequence1e-36163BLASTN svgBLASTP svg
NC_009999:38832388326239723566Shewanella baltica OS195 plasmid pS19502, complete sequence6e-35157BLASTN svgBLASTP svg
NC_004631:53125453125455515123898Salmonella enterica subsp. enterica serovar Typhi Ty2, complete6e-35157BLASTN svgBLASTP svg
NC_003198:2453074*2453074247785124778Salmonella enterica subsp. enterica serovar Typhi str. CT18,6e-35157BLASTN svgBLASTP svg
NC_006905:28576992857699289909341395Salmonella enterica subsp. enterica serovar Choleraesuis str4e-33151BLASTN svgBLASTP svg
NC_006511:529424*52942455225122828Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC2e-32149BLASTN svgBLASTP svg
NC_009788:16360163603711520756Escherichia coli E24377A plasmid pETEC_73, complete sequence1e-29139BLASTN svgBLASTP svg
NC_010465:62348*6234810809945752Yersinia pseudotuberculosis YPIII, complete genome6e-29137BLASTN svgBLASTP svg
NC_010694:10527221052722108466031939Erwinia tasmaniensis, complete genome6e-29137BLASTN svgBLASTP svg
NC_012214:1117325*1117325114343626112Erwinia pyrifoliae Ep1/96, complete genome6e-29137BLASTN svgBLASTP svg
NC_012214:12126161212616123625023635Erwinia pyrifoliae Ep1/96, complete genome6e-29137BLASTN svgBLASTP svg
NC_012214:13555001355500137677021271Erwinia pyrifoliae Ep1/96, complete genome6e-29137BLASTN svgBLASTP svg
NC_012214:2805297*2805297283239127095Erwinia pyrifoliae Ep1/96, complete genome6e-29137BLASTN svgBLASTP svg
NC_013961:3269368*3269368330269433327Erwinia amylovora, complete genome1e-23119BLASTN svgBLASTP svg
NC_010067:1829041*1829041185794928909Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete5e-23117BLASTN svgBLASTP svg
NC_013421:1696746*1696746172309926354Pectobacterium wasabiae WPP163, complete genome8e-22113BLASTN svgBLASTP svg
NC_012779:25861752586175261323427060Edwardsiella ictaluri 93-146, complete genome2e-19105BLASTN svgBLASTP svg
AP010958:2455052*2455052247359918548Escherichia coli O103:H2 str. 12009 DNA, complete genome8e-19103BLASTN svgBLASTP svg
NC_010498:10940001094000111633222333Escherichia coli SMS-3-5, complete genome8e-19103BLASTN svgBLASTP svg
NC_020260:263528*26352829118227655Cronobacter sakazakii Sp291, complete genome8e-19103BLASTN svgBLASTP svg
NC_010694:12508411250841127452923689Erwinia tasmaniensis, complete genome3e-18101BLASTN svgBLASTP svg
NC_014107:17117017117019899927830Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,2e-1695.6BLASTN svgBLASTP svg
NC_009778:259241*25924128824029000Enterobacter sakazakii ATCC BAA-894, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_004431:4270305*4270305431798947685Escherichia coli CFT073, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_008563:47393334739333476356524233Escherichia coli APEC O1, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_020260:19933441993344201786024517Cronobacter sakazakii Sp291, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014500:1862000*1862000191726855269Dickeya dadantii 3937 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_004741:24562972456297247959923303Shigella flexneri 2a str. 2457T, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013282:3719500*3719500373815318654Cronobacter turicensis, complete genome5e-1487.7BLASTN svgBLASTP svg
AC_000091:4501430*4501430452291521486Escherichia coli W3110 DNA, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_000913:44947734494773451470019928Escherichia coli K12, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_010473:4596500*4596500461806621567Escherichia coli str. K-12 substr. DH10B, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_020064:3998715*3998715409080492090Serratia marcescens FGI94, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014976:2231984*2231984225555323570Bacillus subtilis BSn5 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010337:1*14268242682Heliobacterium modesticaldum Ice1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009778:19562251956225198255126327Enterobacter sakazakii ATCC BAA-894, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014306:64215264215266635524204Erwinia billingiae Eb661, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008253:47354184735418477925943842Escherichia coli 536, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015224:44261674426167445165025484Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,7e-1073.8BLASTN svgBLASTP svg
NC_010694:436500*43650046233725838Erwinia tasmaniensis, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013282:20260832026083208019854116Cronobacter turicensis, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013421:27205002720500274898028481Pectobacterium wasabiae WPP163, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014306:31020003102000312424122242Erwinia billingiae Eb661, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014306:35249803524980358375158772Erwinia billingiae Eb661, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014306:49013904901390494640145012Erwinia billingiae Eb661, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020181:96959996959999375524157Enterobacter aerogenes EA1509E, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008543:12767512767515311825444Burkholderia cenocepacia HI2424 chromosome 2, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_008061:21068482106848213789431047Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_007414:56508565089199935492Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_002128:35000350006549030491Escherichia coli O157:H7 str. Sakai plasmid pO157, complete3e-0661.9BLASTN svgBLASTP svg