Pre_GI Gene

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Host: NC_006905 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006905:2987863 Salmonella enterica subsp. enterica serovar Choleraesuis str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
29871992987873675surface presentation of antigens secretory proteinsQuickGO ontologyBLASTP
29878632988774912type III secretion proteinQuickGO ontologyBLASTP
298877429897841011surface presentation of antigens secretory proteinsQuickGO ontologyBLASTP
29897842990227444surface presentation of antigens secretory proteinsQuickGO ontologyBLASTP
299020529915001296type III secretion system ATPaseQuickGO ontologyBLASTP
29914972991904408surface presentation of antigens secretory proteinsQuickGO ontologyBLASTP
299192829939852058invasion proteinQuickGO ontologyBLASTP
299401029951281119invasion proteinQuickGO ontologyBLASTP
299512529968131689invasion protein outer membraneQuickGO ontologyBLASTP
29968102997571762invasion proteinQuickGO ontologyBLASTP
29979162998359444invasion proteinQuickGO ontologyBLASTP
29992412999522282putative ABC-type transport systemQuickGO ontologyBLASTP
29995193000046528putative acetyltransferaseQuickGO ontologyBLASTP
30001193000295177putative cytoplasmic proteinQuickGO ontologyBLASTP
30006723001328657serinethreonine specific protein phosphatase 2QuickGO ontologyBLASTP
30015733002067495hypothetical proteinBLASTP
30020943002762669hypothetical proteinBLASTP
30031853003322138hypothetical proteinBLASTP
30033373003747411putative cytoplasmic proteinQuickGO ontologyBLASTP
300390530064722568DNA mismatch repair proteinQuickGO ontologyBLASTP
30065283006908381putative cytoplasmic proteinQuickGO ontologyBLASTP