Pre_GI Gene

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Host: NC_011083 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011083:3009760 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
300976030107701011antigen presentation protein SpaNQuickGO ontologyBLASTP
30107703011213444surface presentation of antigens protein SpaMQuickGO ontologyBLASTP
301119130124861296flagellum-specific ATP synthaseQuickGO ontologyBLASTP
30124833012890408surface presentation of antigens protein SpaKQuickGO ontologyBLASTP
301291430149712058invasion protein InvAQuickGO ontologyBLASTP
301499630161141119invasion protein InvEQuickGO ontologyBLASTP
301611130177811671type III secretion outer membrane pore YscCHrcC familyQuickGO ontologyBLASTP
30177963018545750invasion proteinQuickGO ontologyBLASTP
30189033019346444cell adheranceinvasion proteinQuickGO ontologyBLASTP
30208323021158327putative cytoplasmic proteinQuickGO ontologyBLASTP
30218563022137282putative ABC-type transport systemQuickGO ontologyBLASTP
30221373022661525acetyltransferase gnat familyQuickGO ontologyBLASTP
30233763024032657serinethreonine-protein phosphatase 2QuickGO ontologyBLASTP
30242043024389186putative cytoplasmic proteinQuickGO ontologyBLASTP
30245633024676114hypothetical proteinBLASTP
302488430274512568DNA mismatch repair protein MutSQuickGO ontologyBLASTP
30275073027887381putative cytoplasmic proteinQuickGO ontologyBLASTP
302788430290921209major facilitator family transporterQuickGO ontologyBLASTP
30292013030112912transcriptional regulator LysR familyQuickGO ontologyBLASTP