Pre_GI: BLASTP Hits

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Query: NC_013716:5020204:5040387 Citrobacter rodentium ICC168, complete genome

Start: 5040387, End: 5041049, Length: 663

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020260:3457597:345759734575973458259663Cronobacter sakazakii Sp291, complete genomeinner membrane protein YqjA9e-101365
NC_009778:3454790:345479034547903455452663Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein9e-101365
NC_008800:3955284:397592039759203976582663Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,DedA family membrane protein2e-62238
NC_015224:3820338:385418138541813854843663Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,DedA family membrane protein2e-62238
NC_008149:650706:651691651691652353663Yersinia pestis Nepal516, complete genomeDedA-family membrane protein7e-62236
NC_010465:733916:733916733916734578663Yersinia pseudotuberculosis YPIII, complete genomeSNARE associated Golgi protein7e-62236
NC_005810:3333000:333409633340963334758663Yersinia pestis biovar Microtus str. 91001, complete genomeDedA family membrane protein7e-62236
NC_004088:3859173:387971638797163880378663Yersinia pestis KIM, complete genomehypothetical protein7e-62236
NC_010634:3905369:392995439299543930616663Yersinia pseudotuberculosis PB1/+, complete genomeSNARE associated Golgi protein7e-62236
NC_003143:741169:742154742154742816663Yersinia pestis CO92, complete genomeputative DedA-family membrane protein7e-62236
NC_006155:3992818:401849740184974019159663Yersinia pseudotuberculosis IP 32953, complete genomeputative DedA-family membrane protein.7e-62236
NC_010159:259695:280232280232280894663Yersinia pestis Angola, complete genomehypothetical protein7e-62236
NC_009381:522731:523716523716524378663Yersinia pestis Pestoides F chromosome, complete genomeDedA family membrane protein7e-62236
NC_017265:3724500:374507637450763745738663Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein7e-62236
NC_017168:341233:362486362486363148663Yersinia pestis A1122 chromosome, complete genomeputative DedA-family membrane protein7e-62236
NC_017160:737000:738039738039738701663Yersinia pestis D182038 chromosome, complete genomeputative DedA-family membrane protein7e-62236
NC_017154:734875:735860735860736522663Yersinia pestis D106004 chromosome, complete genomeputative DedA-family membrane protein7e-62236
NC_014029:792719:793704793704794366663Yersinia pestis Z176003 chromosome, complete genomeputative DedA-family membrane protein7e-62236
NC_009708:692508:693493693493694155663Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein7e-62236
NC_008150:3430000:345059834505983451149552Yersinia pestis Antiqua, complete genomeputative DedA-family membrane protein2e-58225
NC_010084:2822295:285498728549872855670684Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein4e-24111
NC_015381:766355:768624768624769307684Burkholderia gladioli BSR3 chromosome 1, complete sequencePutative DedA family transmembrane protein5e-22104
NC_009074:3163362:319791931979193198647729Burkholderia pseudomallei 668 chromosome I, complete sequencemembrane protein, DedA family3e-21102
NC_009076:3179662:321421732142173214897681Burkholderia pseudomallei 1106a chromosome I, complete sequencemembrane protein, DedA family3e-21102
NC_007434:3588081:362263736226373623488852Burkholderia pseudomallei 1710b chromosome I, complete sequenceDedA2e-21102
NC_006350:3329477:336403333640333364776744Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative DedA family transmembrane protein2e-21102
NC_008836:1072721:110727611072761107956681Burkholderia mallei NCTC 10229 chromosome II, complete sequencededA family protein3e-21101
NC_006348:2372945:240750024075002408180681Burkholderia mallei ATCC 23344 chromosome 1, complete sequencededA family protein3e-21101
NC_009080:2123987:215854221585422159222681Burkholderia mallei NCTC 10247 chromosome II, complete sequencemembrane protein, DedA family3e-21101
NC_009617:4836000:485275648527564853409654Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehypothetical protein1e-2099.8
NC_012438:1564794:158257915825791583187609Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomemembrane protein, DedA family2e-2099.4
NC_012779:2586175:261256926125692613234666Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-2098.6
NC_007951:570500:596249596249596920672Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative DedA family transmembrane protein3e-2098.6
NC_010611:3879190:390354939035493904106558Acinetobacter baumannii ACICU, complete genomeuncharacterized membrane-associated protein2e-1995.9
NC_011000:3514338:356207135620713562754684Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative DedA family protein3e-1995.1
NC_007510:759905:762064762064762747684Burkholderia sp. 383 chromosome 1, complete sequenceputative DedA family transmembrane protein4e-1994.7
NC_017513:997716:101460010146001015244645Neisseria meningitidis G2136 chromosome, complete genomemembrane protein, dedA family4e-1994.7
NC_015277:2096266:210243021024302103092663Sphingobacterium sp. 21 chromosome, complete genomeSNARE associated Golgi protein-related protein4e-1994.7
NC_015214:437733:445233445233445883651Lactobacillus acidophilus 30SC chromosome, complete genomemembrane-associated protein6e-1994.4
NC_008060:306170:309276309276310010735Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceputative DedA family transmembrane protein6e-1994.4
NC_008542:855347:858453858453859187735Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceputative DedA family transmembrane protein6e-1994.4
NC_010508:809974:812109812109812843735Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceSNARE associated Golgi protein5e-1994.4
NC_014724:439594:447961447961448611651Lactobacillus amylovorus GRL 1112 chromosome, complete genomemembrane-associated protein1e-1893.2
NC_008530:469802:474948474948475598651Lactobacillus gasseri ATCC 33323, complete genomeUncharacterized membrane-associated protein1e-1893.2
NC_005362:550823:555960555960556610651Lactobacillus johnsonii NCC 533, complete genomeDedA1e-1893.2
NC_013504:447891:453028453028453678651Lactobacillus johnsonii FI9785 chromosome, complete genomehypothetical protein1e-1893.2
NC_015224:3225000:324891932489193249581663Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein2e-1892.4
NC_018528:446610:452887452887453537651Lactobacillus helveticus R0052 chromosome, complete genomemembrane-associated protein3e-1892
NC_010080:445398:448794448794449444651Lactobacillus helveticus DPC 4571, complete genomeputative membrane protein7e-1890.5
NC_014106:419511:425726425726426376651Lactobacillus crispatus ST1, complete genomeDedA protein1e-1790.1
NC_015738:873653:885612885612886307696Eggerthella sp. YY7918, complete genomemembrane-associated protein4e-1788.2
NC_015602:117939:123120123120123770651Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeDedA family protein4e-1787.8
NC_014960:3410741:342930734293073429975669Anaerolinea thermophila UNI-1, complete genomehypothetical protein6e-1787.4
NC_014727:1537183:155254415525441553203660Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,hypothetical protein1e-1686.3
NC_004129:6240904:624896162489616249617657Pseudomonas fluorescens Pf-5, complete genomeDedA family protein4e-1685.1
NC_015379:6023926:602922760292276029883657Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,membrane-related protein DedA8e-1683.6
NC_010170:1661915:167723316772331677904672Bordetella petrii, complete genomehypothetical protein1e-1583.2
NC_013714:2477638:248181424818142482491678Bifidobacterium dentium Bd1, complete genomeDedA family protein2e-1582.4
NC_017986:3283433:329825032982503298906657Pseudomonas putida ND6 chromosome, complete genomehypothetical protein2e-1582.4
NC_002677:363432:368449368449369117669Mycobacterium leprae TN, complete genomehypothetical protein3e-1582
NC_011896:363448:368465368465369133669Mycobacterium leprae Br4923, complete genomehypothetical protein3e-1582
NC_016830:5994494:599964159996416000297657Pseudomonas fluorescens F113 chromosome, complete genomeDedA integral membrane protein3e-1582
NC_010611:154307:175655175655176296642Acinetobacter baumannii ACICU, complete genomeuncharacterized membrane-associated protein5e-1581.3
NC_013730:834500:861081861081861722642Spirosoma linguale DSM 74, complete genomeSNARE associated Golgi protein-like protein7e-1580.9
NC_003888:7561923:758963275896327590327696Streptomyces coelicolor A3(2), complete genomeintegral membrane protein1e-1479.7
NC_008609:251608:278930278930279538609Pelobacter propionicus DSM 2379, complete genomeDedA family protein1e-1479.7
NC_015703:3325780:332804633280463328684639Runella slithyformis DSM 19594 chromosome, complete genomehypothetical protein2e-1479.3
NC_009727:1542000:154486915448691545477609Coxiella burnetii Dugway 7E9-12, complete genomeDedA family protein3e-1478.6
NC_011528:1282691:128362012836201284228609Coxiella burnetii CbuK_Q154, complete genomeDedA family protein3e-1478.6
NC_011527:1443076:144400514440051444613609Coxiella burnetii CbuG_Q212, complete genomeDedA family protein3e-1478.6
NC_015555:211935:228934228934229563630Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeSNARE associated Golgi protein-like protein3e-1478.6
NC_014363:1973670:198513119851311985799669Olsenella uli DSM 7084 chromosome, complete genomeSNARE associated Golgi protein-like protein8e-1477
NC_008699:1673181:1694650169465016960261377Nocardioides sp. JS614, complete genomephosphoesterase, PA-phosphatase related4e-1374.7
NC_010545:404111:418741418741419379639Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein6e-1374.3
NC_005125:637333:653917653917654552636Gloeobacter violaceus PCC 7421, complete genomehypothetical protein8e-1373.9
NC_008525:1202852:121631512163151216959645Pediococcus pentosaceus ATCC 25745, complete genomeUncharacterized membrane-associated protein1e-1273.2
NC_007164:2046937:206477320647732065411639Corynebacterium jeikeium K411, complete genomehypothetical protein3e-1272
NC_016605:766836:772561772561773202642Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeprotein dedA4e-1271.2
NC_014218:1163513:116949911694991170158660Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeSNARE associated Golgi protein-like protein1e-1170.1
NC_012704:376783:391940391940392896957Corynebacterium kroppenstedtii DSM 44385, complete genomehypothetical protein1e-1170.1
NC_017221:535000:562087562087562785699Bifidobacterium longum subsp. longum KACC 91563 chromosome,hypothetical protein2e-1169.7
NC_004307:2208591:223459322345932235291699Bifidobacterium longum NCC2705, complete genomehypothetical conserved transmembrane protein in the DedA family2e-1169.7
NC_015428:823420:827935827935828579645Lactobacillus buchneri NRRL B-30929 chromosome, complete genomehypothetical protein4e-1168.2
NC_009085:131000:152429152429152947519Acinetobacter baumannii ATCC 17978, complete genomeputative integral membrane protein (DedA)5e-1167.8
NC_008537:130278:149853149853150521669Arthrobacter sp. FB24 plasmid 1, complete sequenceUncharacterized membrane-associated protein-like protein8e-1167
NC_015957:7249873:725127272512727251955684Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein1e-1067
NC_009667:1934818:194775019477501948412663Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceSNARE associated Golgi protein1e-1066.6
NC_015580:1745918:174999117499911750587597Novosphingobium sp. PP1Y, complete genomeDedA family protein1e-1066.6
NC_012912:647369:659976659976660743768Dickeya zeae Ech1591, complete genomeSNARE associated Golgi protein1e-1066.2
NC_016582:11380000:113982671139826711398932666Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein3e-1065.5
NC_013198:813830:818849818849819502654Lactobacillus rhamnosus GG, complete genomeDedA family protein (integral membrane protein)6e-1064.3
NC_013199:811929:813399813399814052654Lactobacillus rhamnosus Lc 705, complete genomeintegral membrane protein, DedA family6e-1064.3
NC_015975:1493636:151185415118541512510657Lactobacillus ruminis ATCC 27782 chromosome, complete genomededA family protein8e-1063.9
NC_014334:769205:771351771351772004654Lactobacillus casei str. Zhang chromosome, complete genomemembrane-associated protein8e-1063.9
NC_010999:880878:882371882371883024654Lactobacillus casei, complete genomehypothetical protein8e-1063.9
NC_007576:435713:441787441787442502716Lactobacillus sakei subsp. sakei 23K, complete genomeHypothetical membrane protein9e-1063.9
NC_007929:473500:477779477779478420642Lactobacillus salivarius subsp. salivarius UCC118, complete genomeDedA family protein1e-0963.2
NC_008254:611437:615447615447616145699Mesorhizobium sp. BNC1, complete genomeDedA family protein2e-0962.8
NC_003888:7028165:704205470420547042737684Streptomyces coelicolor A3(2), complete genomehypothetical protein3e-0962
NC_013715:193647:198435198435199121687Rothia mucilaginosa DY-18, complete genomeuncharacterized membrane-associated protein3e-0962
NC_010172:57500:110845110845111471627Methylobacterium extorquens PA1, complete genomeSNARE associated Golgi protein3e-0962
NC_010505:1205747:120654012065401207061522Methylobacterium radiotolerans JCM 2831, complete genomeSNARE associated Golgi protein4e-0961.6
NC_015697:1814128:182011018201101820757648Lactobacillus reuteri SD2112 chromosome, complete genomeDedA family membrane protein5e-0961.2
NC_007958:2370619:239326723932672393875609Rhodopseudomonas palustris BisB5, complete genomeDedA family protein6e-0961.2
NC_008526:817628:819774819774820427654Lactobacillus casei ATCC 334, complete genomeUncharacterized membrane-associated protein6e-0961.2
NC_007517:1515493:153136515313651532003639Geobacter metallireducens GS-15, complete genomeDedA8e-0960.5
NC_009513:618000:623082623082623729648Lactobacillus reuteri F275, complete genomeSNARE associated Golgi protein1e-0860.5
NC_014958:514225:529880529880530539660Deinococcus maricopensis DSM 21211 chromosome, complete genomeSNARE associated Golgi protein-like protein1e-0860.1
NC_011004:2457778:248091424809142481522609Rhodopseudomonas palustris TIE-1, complete genomeSNARE associated Golgi protein1e-0859.7
NC_009664:4423829:453490445349044535560657Kineococcus radiotolerans SRS30216, complete genomeSNARE associated Golgi protein1e-0859.7
NC_016632:74569:745697456975099531Serratia symbiotica str. 'Cinara cedri' chromosome, completehypothetical protein2e-0858.9
NC_015850:1850741:185664218566421857049408Acidithiobacillus caldus SM-1 chromosome, complete genomeDedA family protein5e-0857.8
NC_021171:2697398:269739826973982698003606Bacillus sp. 1NLA3E, complete genomehypothetical protein7e-0857.4
NC_015161:354000:369070369070369678609Deinococcus proteolyticus MRP chromosome, complete genomehypothetical protein7e-0857.4
NC_010814:294394:310701310701311321621Geobacter lovleyi SZ, complete genomeSNARE associated Golgi protein9e-0857
NC_013131:9711508:971580597158059716539735Catenulispora acidiphila DSM 44928, complete genomeSNARE associated Golgi protein2e-0755.8
NC_011369:1135592:1182044118204411840742031Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completePA-phosphatase-like phosphoesterase4e-0755.1
NC_014328:180482:191420191420192028609Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein3e-0755.1
NC_017256:144854:145199145199145972774Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,hypothetical protein4e-0754.7
NC_016776:3258939:327227232722723272913642Bacteroides fragilis 638R, complete genomehypothetical protein5e-0754.7
NC_003228:3212500:323486532348653235506642Bacteroides fragilis NCTC 9343, complete genomehypothetical protein5e-0754.7
NC_006347:3166000:317349431734943174135642Bacteroides fragilis YCH46, complete genomeputative alkaline phosphatase5e-0754.7
NC_013316:371953:383783383783384391609Clostridium difficile R20291, complete genomehypothetical protein5e-0754.7
NC_009089:370555:382386382386382994609Clostridium difficile 630, complete genomehypothetical protein5e-0754.7
NC_021182:1654903:165752016575201658143624Clostridium pasteurianum BC1, complete genomeputative membrane-associated protein6e-0754.3
NC_014831:388007:408073408073408678606Thermaerobacter marianensis DSM 12885 chromosome, complete genomeSNARE associated Golgi protein-related protein1e-0653.1
NC_002952:2653482:267462426746242675235612Staphylococcus aureus subsp. aureus MRSA252, complete genomeDedA family protein3e-0652
NC_007622:2501562:252278325227832523394612Staphylococcus aureus RF122, complete genomeprobable alkaline phosphatase3e-0652
NC_002939:1601706:161594916159491616563615Geobacter sulfurreducens PCA, complete genomeDedA family protein3e-0652
NC_004545:141478:142971142971143744774Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeputative DedA-family membrane protein4e-0651.6
NC_013520:1936209:194679919467991947386588Veillonella parvula DSM 2008, complete genomeSNARE associated Golgi protein-related protein6e-0651.2
NC_013939:1625491:162660316266031627205603Deferribacter desulfuricans SSM1, complete genomehypothetical protein8e-0650.4
NC_014210:723719:742315742315743010696Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,SNARE associated Golgi protein-related protein8e-0650.4