Pre_GI Gene

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Host: NC_013198 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013198:813830 Lactobacillus rhamnosus GG, complete genome

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8127668138331068conserved hypothetical protein multitransmembrane protein by homologyQuickGO ontologyBLASTP
813830814567738conserved hypothetical protein multitransmembrane protein by homologyQuickGO ontologyBLASTP
814569815171603similar to phosphoesterase or phosphohydrolaseQuickGO ontologyBLASTP
81528481666013775-nucleotidase23-cyclic phosphodiesterase related esteraseQuickGO ontologyBLASTP
816764817372609transcriptional regulator YutDQuickGO ontologyBLASTP
817381818157777HAD-superfamily hydrolase sugar phosphatase subfamily IIAQuickGO ontologyBLASTP
818158818790633conserved hypothetical protein integral membrane protein by homologyQuickGO ontologyBLASTP
818849819502654DedA family protein integral membrane proteinQuickGO ontologyBLASTP
819588820091504Phosphatidylglycerophosphatase A related protein low temperature requirement C protein also similar to Bacillus subtilis YutG proteinQuickGO ontologyBLASTP
820186821172987thioredoxin-disulfide reductase NADP-thioredoxin reductase NADPH oxidized thioredoxin oxidoreductaseQuickGO ontologyBLASTP
821407821991585peptidyl-prolyl cis-trans isomerase rotamase-cyclophilin familyQuickGO ontologyBLASTP
822055822438384polyribonucleotide nucleotidyltransferase general stress protein 13 RNA binding protein S1 domainQuickGO ontologyBLASTP
823640823873234hypothetical proteinBLASTP
823827824144318hypothetical proteinBLASTP
824129824323195hypothetical proteinBLASTP
824610825008399hypothetical proteinBLASTP
824984825196213hypothetical proteinBLASTP
825603825998396hypothetical proteinBLASTP
826913827212300lipoproteinQuickGO ontologyBLASTP
827350827688339metal-dependent RNase consists of a metallo-beta-lactamase domain and an RNA-binding KH domainQuickGO ontologyBLASTP
829104829415312hypothetical proteinBLASTP
830179830328150hypothetical proteinBLASTP
831359831898540ComXQuickGO ontologyBLASTP
8324128339951584amino acid permease-associated regionQuickGO ontologyBLASTP
8342438354511209glycosyl transferase group 1 family proteinQuickGO ontologyBLASTP