Pre_GI Gene

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Host: NC_008530 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008530:469802 Lactobacillus gasseri ATCC 33323, complete genome

Host Lineage: Lactobacillus gasseri; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Lactobacillus gasseri ATCC 33323 is a human isolate and is the type strain. This organism has been shown to have probiotic activities such as production of bacteriocins, macrophage stimulation and adherence to intestinal tissues. Normal gastrointestinal bacterium. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus gasseri is a rod-shaped, gram-positive anaerobe. Of the lactobacilli, it is the most amenable to DNA introduction and manipulation which should prove useful in the functional genomic analysis of this species. It has been shown to be an effective probiotic in suppressing Helicobacter pylori infections in humans.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4698024711841383Glycerophosphoryl diester phosphodiesteraseQuickGO ontologyBLASTP
471286471612327hypothetical proteinBLASTP
47162647299313685-nucleotidase23-cyclic phosphodiesterase related esteraseQuickGO ontologyBLASTP
473005473550546hypothetical proteinBLASTP
473553474335783Predicted sugar phosphatase of the HAD superfamilyQuickGO ontologyBLASTP
474323474940618Predicted membrane proteinQuickGO ontologyBLASTP
474948475598651Uncharacterized membrane-associated proteinQuickGO ontologyBLASTP
475625476623999Thioredoxin reductaseQuickGO ontologyBLASTP
476682477047366RNA binding protein S1 domainQuickGO ontologyBLASTP
477570479148157916S ribosomal RNAQuickGO ontologyBLASTP
479701482332263223S ribosomal RNAQuickGO ontologyBLASTP
4823324824501195S ribosomal RNAQuickGO ontologyBLASTP
48246348253573tRNA-AsnQuickGO ontology
48255848264790tRNA-SerQuickGO ontologyBLASTP
48276448283572tRNA-GluQuickGO ontologyBLASTP
48285948293173tRNA-ValQuickGO ontologyBLASTP
4830484842861239S-adenosylmethionine synthetaseQuickGO ontologyBLASTP
4842704857331464Permease of the major facilitator superfamilyQuickGO ontologyBLASTP
485781486518738Membrane-associated phospholipid phosphataseQuickGO ontologyBLASTP
4867334891472415Leucyl-tRNA synthetaseQuickGO ontologyBLASTP
4892494909071659Polysaccharide transport membrane proteinQuickGO ontologyBLASTP
4910134921461134hypothetical proteinBLASTP