Pre_GI Gene

Some Help

Host: NC_009513 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009513:618000 Lactobacillus reuteri F275, complete genome

Host Lineage: Lactobacillus reuteri; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain (JCM 1112, F275) is the type strain for the species. It is a human isolate, which is unable to colonize the intestinal tract of mice. Normal gut bacterium. They are commonly found in the oral, vaginal, and intestinal tracts of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained. These cultures produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also used as a starter molecule for complex organic molecule syntheses. Lactobacillus reuteri is a member of the normal microbial community of the gut in humans and animals. This organism produces antibiotic compounds, such as reutericin and reuterin, which have inhibitory effects on pathogenic microorganisms.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
618366619199834Adenine-specific DNA methylase-like proteinQuickGO ontologyBLASTP
6192136204091197acetate kinaseQuickGO ontologyBLASTP
620524621132609phosphoesterase or phosphohydrolase-like proteinQuickGO ontologyBLASTP
621153621698546protein of unknown function DUF1027QuickGO ontologyBLASTP
621707622477771HAD-superfamily subfamily IIA hydrolase like proteinQuickGO ontologyBLASTP
622461623114654integral membrane protein TIGR01906QuickGO ontologyBLASTP
623082623729648SNARE associated Golgi proteinQuickGO ontologyBLASTP
624373625959158716S ribosomal RNAQuickGO ontologyBLASTP
62604462611875tRNA-IleQuickGO ontology
62612262619473tRNA-AlaQuickGO ontologyBLASTP
626353629277292523S ribosomal RNAQuickGO ontologyBLASTP
6293556294741205S ribosomal RNAQuickGO ontologyBLASTP
62947662954873tRNA-ValQuickGO ontologyBLASTP
62956762963973tRNA-LysQuickGO ontologyBLASTP
62968362975573tRNA-ThrQuickGO ontologyBLASTP
62976562983672tRNA-GlyQuickGO ontology
62985362993886tRNA-LeuQuickGO ontologyBLASTP
62994763002074tRNA-ArgQuickGO ontologyBLASTP
63002663009974tRNA-ProQuickGO ontology
63013063020374tRNA-MetQuickGO ontology
63021963029577tRNA-MetQuickGO ontologyBLASTP
63034563043288tRNA-SerQuickGO ontologyBLASTP
63044163051474tRNA-MetQuickGO ontology
63051963059375tRNA-AspQuickGO ontology
63060363067573tRNA-PheQuickGO ontologyBLASTP
63069163076171tRNA-GlyQuickGO ontologyBLASTP
63077163084575tRNA-IleQuickGO ontology
63084863093588tRNA-SerQuickGO ontologyBLASTP
63094063101172tRNA-GluQuickGO ontologyBLASTP
63102263109574tRNA-MetQuickGO ontology
63110063117475tRNA-AspQuickGO ontology
631363631854492hypothetical proteinBLASTP
632102632503402arsenate reductase and relatedQuickGO ontologyBLASTP
632629633300672adaptor proteinQuickGO ontologyBLASTP
6333846344181035Competence CoiA family proteinQuickGO ontologyBLASTP
6344206357961377peptidase U34 dipeptidaseQuickGO ontologyBLASTP
635868636506639hypothetical proteinBLASTP
636671637324654RelASpoT domain proteinQuickGO ontologyBLASTP
637328638140813inorganic polyphosphateATP-NAD kinaseQuickGO ontologyBLASTP
638140639045906pseudouridine synthase RluA familyQuickGO ontologyBLASTP
639554641140158716S ribosomal RNAQuickGO ontologyBLASTP
64122564129975tRNA-IleQuickGO ontology
64130364137573tRNA-AlaQuickGO ontologyBLASTP
641534644458292523S ribosomal RNAQuickGO ontologyBLASTP