Pre_GI Gene

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Host: NC_013199 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013199:811929 Lactobacillus rhamnosus Lc 705, complete genome

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
811929812705777sugar phosphatase HAD superfamily subfamily IIAQuickGO ontologyBLASTP
812706813338633conserved hypothetical protein integral membrane protein by homologyQuickGO ontologyBLASTP
813399814052654integral membrane protein DedA familyQuickGO ontologyBLASTP
814138814641504phosphatidylglycerophosphatase A related proteinQuickGO ontologyBLASTP
814736815722987thioredoxin-disulfide reductaseQuickGO ontologyBLASTP
815957816541585peptidyl-prolyl cis-trans isomerase rotamase-cyclophilin familyQuickGO ontologyBLASTP
816629816988360polyribonucleotide nucleotidyltransferase general stress protein 13 RNA binding protein S1 domainQuickGO ontologyBLASTP
818084818269186hypothetical proteinBLASTP
818220818423204hypothetical proteinBLASTP
818377818694318hypothetical proteinBLASTP
818679818873195hypothetical proteinBLASTP
819160819558399hypothetical proteinBLASTP
819534819746213hypothetical proteinBLASTP
820153820548396hypothetical proteinBLASTP
821463821762300lipoproteinQuickGO ontologyBLASTP
821900822238339metal-dependent RNase consists of a metallo-beta-lactamase domain and an RNA-binding KH domainQuickGO ontologyBLASTP
823648823959312hypothetical proteinBLASTP
824723824872150hypothetical proteinBLASTP
825893826432540ComXQuickGO ontologyBLASTP
8269468285291584amino acid permease-associated regionQuickGO ontologyBLASTP
8287778299851209glycosyl transferase group 1 family proteinQuickGO ontologyBLASTP
8299888310161029glycosyl transferase CpoAQuickGO ontologyBLASTP
8310298320391011conserved hypothetical protein integral membrane protein by homologyQuickGO ontologyBLASTP
8322048333761173aromatic amino acid aminotransferase acetyldiaminopimelate aminotransferaseQuickGO ontologyBLASTP
833674833955282YkuJ protein-like proteinQuickGO ontologyBLASTP