Pre_GI: BLASTP Hits

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Query: NC_013199:811929:825893 Lactobacillus rhamnosus Lc 705, complete genome

Start: 825893, End: 826432, Length: 540

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013198:813830:831359831359831898540Lactobacillus rhamnosus GG, complete genomeComX1e-99361
NC_010999:880878:896272896272896820549Lactobacillus casei, complete genomeCompetence-specific sigma factor ComX8e-73272
NC_014334:769205:782944782944783492549Lactobacillus casei str. Zhang chromosome, complete genomecomX7e-72269
NC_008526:817628:833749833749834297549Lactobacillus casei ATCC 334, complete genomeComX1e-71268
NC_016928:561138:564294564294564863570Staphylococcus aureus subsp. aureus M013 chromosome, completeRNA polymerase sporulation specific sigmafactor SigH3e-0651.2
NC_017351:566717:572381572381572950570Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeigma-70 family RNA polymerase sigma factor8e-0650.1
NC_002952:582365:585521585521586090570Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative DNA-binding protein8e-0650.1
NC_017342:2758157:277806627780662778635570Staphylococcus aureus subsp. aureus TCH60 chromosome, completeDNA-binding protein8e-0650.1
NC_017337:580850:586514586514587083570Staphylococcus aureus subsp. aureus ED133 chromosome, completehypothetical protein9e-0649.7
NC_017338:556319:558082558082558651570Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeRNA polymerase factor sigma-701e-0549.7