Pre_GI: BLASTP Hits

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Query: NC_013199:811929:831029 Lactobacillus rhamnosus Lc 705, complete genome

Start: 831029, End: 832039, Length: 1011

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014334:769205:7881277881277891401014Lactobacillus casei str. Zhang chromosome, complete genomeputative integral membrane protein7e-144509
NC_007929:428743:4309604309604319791020Lactobacillus salivarius subsp. salivarius UCC118, complete genomeHypothetical secreted protein4e-84311
NC_008497:1498430:1509273150927315103071035Lactobacillus brevis ATCC 367, complete genomePredicted integral membrane protein8e-81300
NC_015697:321311:3358823358823368951014Lactobacillus reuteri SD2112 chromosome, complete genomeintegral membrane protein1e-79296
NC_016605:1177485:1193256119325611942781023Pediococcus claussenii ATCC BAA-344 chromosome, complete genomehypothetical protein1e-79296
NC_015428:1668465:1682850168285016838811032Lactobacillus buchneri NRRL B-30929 chromosome, complete genomeLysylphosphatidylglycerol synthetase/UPF01045e-78291
NC_015975:752927:7539527539527549711020Lactobacillus ruminis ATCC 27782 chromosome, complete genomehypothetical protein1e-77290
NC_009513:1363987:1375717137571713767301014Lactobacillus reuteri F275, complete genomeconserved hypothetical protein 3742e-76286
NC_008525:664500:6701556701556711891035Pediococcus pentosaceus ATCC 25745, complete genomePredicted integral membrane protein8e-76283
NC_015978:996933:1014340101434010153531014Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completehypothetical protein4e-73275
NC_015214:437733:4609324609324619571026Lactobacillus acidophilus 30SC chromosome, complete genomeintegral membrane protein2e-55216
NC_014724:439594:4611834611834622081026Lactobacillus amylovorus GRL 1112 chromosome, complete genomeintegral membrane protein5e-53208
NC_008528:610070:6124076124076134351029Oenococcus oeni PSU-1, complete genomePredicted integral membrane protein3e-52205
NC_008530:1551356:1570072157007215710881017Lactobacillus gasseri ATCC 33323, complete genomePredicted integral membrane protein2e-50200
NC_013504:1468227:1483851148385114848671017Lactobacillus johnsonii FI9785 chromosome, complete genomehypothetical protein4e-50198
NC_006814:403723:4272794272794283041026Lactobacillus acidophilus NCFM, complete genomehypothetical protein6e-50197
NC_005362:1651767:1674014167401416750301017Lactobacillus johnsonii NCC 533, complete genomehypothetical protein5e-49195
NC_018528:446610:4669684669684679931026Lactobacillus helveticus R0052 chromosome, complete genomeintegral membrane protein1e-47190
NC_014106:419511:4384864384864395111026Lactobacillus crispatus ST1, complete genomeIntegral membrane protein1e-47190
NC_015602:117939:1354611354611364831023Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeintegral membrane protein3e-47189
NC_010080:445398:4612654612654622871023Lactobacillus helveticus DPC 4571, complete genomeputative membrane protein3e-46185
NC_013316:3056925:3073334307333430743981065Clostridium difficile R20291, complete genomehypothetical protein2e-0963.5
NC_009089:3142976:3159561315956131606251065Clostridium difficile 630, complete genomehypothetical protein2e-0963.5
NC_019978:2293327:2294720229472022957361017Halobacteroides halobius DSM 5150, complete genomehypothetical protein2e-0860.1