Pre_GI Gene

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Host: NC_017221 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017221:535000 Bifidobacterium longum subsp. longum KACC 91563 chromosome,

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5352695364801212bifunctional PLP-dependent enzymeQuickGO ontologyBLASTP
536445536609165hypothetical protein
536797536976180hypothetical proteinBLASTP
5369985403093312isoleucyl-tRNA synthaseQuickGO ontologyBLASTP
541152542081930phage integraseQuickGO ontologyBLASTP
5436635462302568hypothetical proteinBLASTP
5462305474921263restriction endonuclease S subunitQuickGO ontologyBLASTP
5475075490841578hypothetical proteinBLASTP
5490715523613291HsdR-like protein of type I restriction modification systemQuickGO ontologyBLASTP
552665552817153hypothetical protein
5532515544711221metkQuickGO ontologyBLASTP
554749555033285DNA-directed RNA polymerase subunit omegaQuickGO ontologyBLASTP
5553285570971770dihydroxy-acid dehydrataseQuickGO ontologyBLASTP
557189558175987methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
558199558903705hydrolaseQuickGO ontologyBLASTP
5589625612502289primosome assembly protein PriAQuickGO ontologyBLASTP
561314562036723phosphoserine phosphataseQuickGO ontologyBLASTP
562087562785699hypothetical proteinBLASTP