Pre_GI Gene

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Host: NC_005362 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_005362:550823 Lactobacillus johnsonii NCC 533, complete genome

Host Lineage: Lactobacillus johnsonii; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is a human isolate from the Nestle strain collection that has been studied for immunomodulation as well as pathogen inhibition. Probiotic microorganism. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus johnsonii is found in the human gut. It is a member of the acidophilus group of intestinal lactobacilli that has been extensively studied for their "probiotic" activities.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5508235522051383hypothetical proteinBLASTP
552305552631327hypothetical proteinBLASTP
5526445540231380hypothetical proteinBLASTP
554023554562540hypothetical proteinBLASTP
554565555347783hypothetical proteinBLASTP
555344555952609hypothetical proteinBLASTP
555960556610651DedAQuickGO ontologyBLASTP
556637557593957hypothetical proteinBLASTP
557693558064372hypothetical proteinBLASTP
558550560200165116S ribosomal RNAQuickGO ontologyBLASTP
560300563350305123S ribosomal RNAQuickGO ontologyBLASTP
5633375634531175S ribosomal RNAQuickGO ontologyBLASTP
56346656353873tRNA-AsnQuickGO ontology
56356156365090tRNA-SerQuickGO ontologyBLASTP
56376956384072tRNA-GluQuickGO ontology
56386456393673tRNA-ValQuickGO ontologyBLASTP
5640865652941209S-adenosylmethionine synthetaseQuickGO ontologyBLASTP
5652845667411458major facilitator superfamily permeaseQuickGO ontologyBLASTP
566784567434651hypothetical proteinBLASTP
5677345701482415leucyl-tRNA synthetaseQuickGO ontologyBLASTP
5702505719081659export protein for polysaccharides and teichoic acidsQuickGO ontologyBLASTP
5720155731511137hypothetical proteinBLASTP
573239573985747hypothetical proteinBLASTP
574029574874846hypothetical proteinBLASTP
574927575853927D-alanyl-D-alanine carboxypeptidaseQuickGO ontologyBLASTP