Pre_GI Gene

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Host: NC_015975 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015975:1493636 Lactobacillus ruminis ATCC 27782 chromosome, complete genome

Host Lineage: Lactobacillus ruminis; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism was isolated from bovine rumen. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
14929271493649723ribosomal small subunit pseudouridine synthase AQuickGO ontologyBLASTP
149363614949881353amino acid permeaseQuickGO ontologyBLASTP
14952001495376177hypothetical protein
149543214978462415leucyl-tRNA synthetaseQuickGO ontologyBLASTP
149817115003482178AutolysinQuickGO ontologyBLASTP
150058915017821194S-adenosylmethionine synthetaseQuickGO ontologyBLASTP
1502205150227874tRNA-HisQuickGO ontology
1502326150239974tRNA-ValQuickGO ontologyBLASTP
1502609150268173tRNA-GluQuickGO ontologyBLASTP
1502950150302374tRNA-PheQuickGO ontology
1503417150349175tRNA-MetQuickGO ontology
1503520150359475tRNA-ProQuickGO ontology
1503595150367278tRNA-ArgQuickGO ontologyBLASTP
1503775150384874tRNA-ThrQuickGO ontologyBLASTP
1503928150400174tRNA-LysQuickGO ontology
1504006150407974tRNA-ValQuickGO ontologyBLASTP
150408415042011185S ribosomal RNAQuickGO ontologyBLASTP
15095171509900384RNA Binding proteinQuickGO ontologyBLASTP
15099121510496585peptidyl-prolyl cis-trans isomeraseQuickGO ontologyBLASTP
151069515117021008thioredoxin reductaseQuickGO ontologyBLASTP
15118541512510657dedA family proteinQuickGO ontologyBLASTP
151256015138281269major facilitator superfamily proteinQuickGO ontologyBLASTP
15138691514495627intergral membrane proteinQuickGO ontologyBLASTP
15144801515253774N-acetylglucosamine catabolic proteinQuickGO ontologyBLASTP
15152751515871597hypothetical proteinBLASTP