Pre_GI: BLASTP Hits

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Query: NC_021508:12543:19368 Treponema pallidum subsp. pallidum SS14, complete genome

Start: 19368, End: 22049, Length: 2682

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This organisms is divided into subspecies each of which causes a specific disease. pallidum causes the venereal disease syphilis. pertenue, carateum and endemicum cause the skin infections yaws, pinta and bejel, respectively. Cells are motile, slender, helically shaped flexible organisms, 0.1-0.18 microns in diameter and 6-20 microns long.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017268:1:1937119371220522682Treponema pallidum subsp. pallidum str. Chicago chromosome,01836
NC_016844:12545:1937019370220512682Treponema pallidum subsp. pallidum DAL-1 chromosome, completetranscription elongation factor GreA01836
NC_016848:12548:1937319373220542682Treponema pallidum subsp. pertenue str. CDC2 chromosome, completetranscription elongation factor GreA01835
NC_016843:1:1937319373220542682Treponema pallidum subsp. pertenue str. Gauthier chromosome,transcription elongation factor GreA01835
NC_016842:1:1937319373220542682Treponema pallidum subsp. pertenue str. SamoaD chromosome, completetranscription elongation factor GreA01835
NC_010741:12542:1941519415213881974Treponema pallidum subsp. pallidum SS14, complete genometranscription elongation factor01238
NC_000919:12545:1941819418213911974Treponema pallidum subsp. pallidum str. Nichols, complete genometranscription elongation factor01238
NC_014484:1163576:1198728119872812014242697Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein0785
NC_008710:108057:1278651278651305672703Borrelia turicatae 91E135, complete genometranscription elongation factor GreA4e-138492
NC_010673:113133:1281021281021308072706Borrelia hermsii DAH, complete genometranscription elongation factor GreA1e-137491
NC_000919:12545:215582155822046489Treponema pallidum subsp. pallidum str. Nichols, complete genometranscription elongation factor (greA)1e-89331
NC_010741:12542:215552155522043489Treponema pallidum subsp. pallidum SS14, complete genometranscription elongation factor GreA1e-89331
NC_019908:1296870:1311199131119913134062208Brachyspira pilosicoli P43/6/78 chromosome, complete genometranscript cleavage factor/hypothetical protein6e-42173
NC_016894:1092005:109614710961471096629483Acetobacterium woodii DSM 1030 chromosome, complete genometranscription elongation factor GreA2e-1791.7
NC_015318:1151422:117480011748001175270471Hippea maritima DSM 10411 chromosome, complete genometranscription elongation factor GreA3e-1688.2
NC_012880:3915500:392881439288143929290477Dickeya dadantii Ech703, complete genometranscription elongation factor GreA1e-1585.9
NC_019814:320260:332304332304332780477Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonastranscription elongation factor GreA7e-1583.6
NC_009465:813816:831932831932832411480Candidatus Vesicomyosocius okutanii HA, complete genometranscription elongation factor GreA1e-1482.4
NC_015977:3324000:334119633411963341681486Roseburia hominis A2-183 chromosome, complete genometranscription elongation factor GreA2e-1482.4
NC_014831:149626:155894155894156373480Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscription elongation factor GreA2e-1482
NC_017243:2190000:220210222021022202566465Brachyspira intermedia PWS/A chromosome, complete genometranscription elongation factor GreA4e-1480.9
NC_004129:957890:963439963439963915477Pseudomonas fluorescens Pf-5, complete genometranscription elongation factor GreA4e-1480.9
NC_015422:2806832:280798628079862808462477Alicycliphilus denitrificans K601 chromosome, complete genometranscription elongation factor GreA6e-1480.5
NC_007759:623116:635172635172635657486Syntrophus aciditrophicus SB, complete genometranscription elongation factor7e-1480.1
NC_020299:149118:161146161146161622477Candidatus Kinetoplastibacterium oncopeltii TCC290E, completetranscription elongation factor GreA7e-1480.1
NC_014335:4113154:411750441175044118031528Bacillus cereus biovar anthracis str. CI chromosome, completetranscription elongation factor9e-1479.7
NC_018664:2459994:247645724764572476933477Clostridium acidurici 9a chromosome, complete genometranscription elongation factor GreA9e-1479.7
NC_017200:4191963:419713941971394197666528Bacillus thuringiensis serovar finitimus YBT-020 chromosome,transcription elongation factor GreA1e-1379.7
NC_011772:4321117:432379843237984324325528Bacillus cereus G9842, complete genometranscription elongation factor GreA1e-1379.3
NC_014393:4541000:455994645599464560422477Clostridium cellulovorans 743B chromosome, complete genometranscription elongation factor GreA1e-1379.3
NC_012563:4004709:403019040301904030672483Clostridium botulinum A2 str. Kyoto, complete genometranscription elongation factor GreA1e-1379.3
NC_004557:162670:169858169858170418561Clostridium tetani E88, complete genometranscription elongation factor GreA1e-1379.3
NC_010516:3807780:383327238332723833754483Clostridium botulinum B1 str. Okra, complete genometranscription elongation factor GreA1e-1379.3
NC_009699:3839575:386505338650533865535483Clostridium botulinum F str. Langeland chromosome, complete genometranscription elongation factor GreA1e-1379.3
NC_017297:3838189:386367538636753864157483Clostridium botulinum F str. 230613 chromosome, complete genometranscription elongation factor GreA1e-1379.3
NC_015555:277364:293664293664294137474Thermoanaerobacterium xylanolyticum LX-11 chromosome, completetranscription elongation factor GreA2e-1379
NC_011658:4171237:417659341765934177069477Bacillus cereus AH187 chromosome, complete genometranscription elongation factor GreA2e-1378.6
NC_011969:4065460:407195340719534072429477Bacillus cereus Q1 chromosome, complete genometranscription elongation factor grea2e-1378.6
NC_010524:3094303:310650431065043106980477Leptothrix cholodnii SP-6, complete genometranscription elongation factor GreA2e-1378.6
NC_007530:4176462:418581541858154186291477Bacillus anthracis str. 'Ames Ancestor', complete genometranscription elongation factor GreA2e-1378.6
NC_005957:4169610:417497241749724175448477Bacillus thuringiensis serovar konkukian str. 97-27, completetranscription elongation factor GreA2e-1378.6
NC_014378:131810:133032133032133505474Acetohalobium arabaticum DSM 5501 chromosome, complete genometranscription elongation factor GreA3e-1377.8
NC_009922:490500:505333505333505812480Alkaliphilus oremlandii OhILAs, complete genometranscription elongation factor GreA4e-1377.8
NC_012560:4311906:433028243302824330758477Azotobacter vinelandii DJ, complete genomeProkaryotic transcription elongation factor GreA5e-1377.4
NC_021150:4311902:433027843302784330754477Azotobacter vinelandii CA6, complete genometranscription elongation factor GreA5e-1377.4
NC_020063:528296:528296528296528772477Enterobacteriaceae bacterium strain FGI 57, complete genometranscription elongation factor GreA5e-1377.4
NC_016893:563890:568045568045568521477Wigglesworthia glossinidia endosymbiont of Glossina morsitanstranscription elongation factor5e-1377.4
NC_013316:4018451:403255640325564033035480Clostridium difficile R20291, complete genometranscription elongation factor grea5e-1377.4
NC_009089:4140764:415423441542344154713480Clostridium difficile 630, complete genometranscription elongation factor5e-1377.4
NC_021182:4602683:462331946233194623801483Clostridium pasteurianum BC1, complete genometranscription elongation factor GreA4e-1377.4
NC_009495:3735703:376226637622663762748483Clostridium botulinum A str. ATCC 3502 chromosome, complete genometranscription elongation factor GreA4e-1377.4
NC_009697:3711692:373825537382553738737483Clostridium botulinum A str. ATCC 19397 chromosome, completetranscription elongation factor GreA4e-1377.4
NC_009698:3609881:363536536353653635847483Clostridium botulinum A str. Hall chromosome, complete genometranscription elongation factor GreA4e-1377.4
NC_011004:4947980:496777749677774968253477Rhodopseudomonas palustris TIE-1, complete genometranscription elongation factor GreA1e-1276.3
NC_005296:4574213:461225246122524612728477Rhodopseudomonas palustris CGA009, complete genometranscription elongation factor GreA1e-1276.3
NC_019815:782987:791359791359791835477Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneitranscription elongation factor GreA1e-1276.3
NC_010519:1684901:168490116849011685377477Haemophilus somnus 2336 chromosome, complete genometranscription elongation factor GreA1e-1275.9
NC_013716:4885776:489403748940374894513477Citrobacter rodentium ICC168, complete genometranscription elongation factor1e-1275.9
NC_010278:1045884:104948910494891049965477Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,transcription elongation factor GreA1e-1275.9
NC_009053:1081651:108525610852561085732477Actinobacillus pleuropneumoniae L20, complete genometranscription elongation factor GreA1e-1275.9
NC_002528:404545:424946424946425425480Buchnera aphidicola str. APS (Acyrthosiphon pisum), completetranscription elongation factor GreA1e-1275.9
NC_015968:4117835:416070141607014161177477Enterobacter asburiae LF7a chromosome, complete genometranscription elongation factor GreA2e-1275.5
NC_010184:4219257:422221142222114222738528Bacillus weihenstephanensis KBAB4, complete genometranscription elongation factor GreA2e-1275.5
NC_004545:392685:406178406178406657480Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genometranscription elongation factor GreA2e-1275.1
NC_009454:259022:262834262834263310477Pelotomaculum thermopropionicum SI, complete genometranscription elongation factor2e-1275.1
NC_014328:4471995:449191744919174492372456Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative transcription elongation factor3e-1274.7
NC_006833:409599:414560414560415054495Wolbachia endosymbiont strain TRS of Brugia malayi, completeTranscription elongation factor, GreA3e-1274.7
NC_015687:3326461:334510833451083345584477Clostridium acetobutylicum DSM 1731 chromosome, complete genometranscription elongation factor GreA4e-1274.3
NC_003030:3324834:334348233434823343958477Clostridium acetobutylicum ATCC 824, complete genometranscription elongation factor GreA4e-1274.3
NC_008593:153014:163989163989164468480Clostridium novyi NT, complete genometranscription elongation factor greA3e-1274.3
NC_002978:618723:641759641759642253495Wolbachia endosymbiont of Drosophila melanogaster, complete genometranscription elongation factor GreA3e-1274.3
NC_012416:531772:536755536755537249495Wolbachia sp. wRi, complete genometranscription elongation factor GreA5e-1273.9
NC_004842:1031020:105108510510851051609525Anaplasma marginale str. St. Maries, complete genometranscription elongation factor greA6e-1273.9
NC_015519:245036:247769247769248245477Tepidanaerobacter sp. Re1 chromosome, complete genometranscription elongation factor GreA6e-1273.6
NC_015565:173774:179285179285179761477Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completetranscription elongation factor GreA7e-1273.6
NC_017259:388000:407534407534408013480Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,transcription elongation factor GreA9e-1273.2
NC_010320:819326:842047842047842520474Thermoanaerobacter sp. X514 chromosome, complete genometranscription elongation factor GreA2e-1172
NC_007907:225948:234379234379234849471Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1171.6
NC_013416:939668:941271941271941747477Aggregatibacter actinomycetemcomitans D11S-1, complete genometranscription elongation factor GreA3e-1171.2
NC_004344:257471:274883274883275359477Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein3e-1171.2
NC_020075:114790:116759116759117235477Candidatus Blochmannia chromaiodes str. 640, complete genometranscription elongation factor GreA3e-1171.2
NC_010981:1243888:126900012690001269494495Wolbachia pipientis, complete genometranscription elongation factor GreA3e-1171.2
NC_015425:163000:174106174106174561456Clostridium botulinum BKT015925 chromosome, complete genometranscription elongation factor GreA4e-1170.9
NC_009012:3421000:342416634241663424645480Clostridium thermocellum ATCC 27405, complete genometranscription elongation factor GreA8e-1170.1
NC_007292:113396:116889116889117365477Candidatus Blochmannia pennsylvanicus str. BPEN, complete genometranscription elongation factor8e-1170.1
NC_011146:2200142:220350022035002203976477Geobacter bemidjiensis Bem, complete genometranscription elongation factor GreA9e-1169.7
NC_011898:426951:448093448093448569477Clostridium cellulolyticum H10, complete genometranscription elongation factor GreA1e-1069.3
NC_020291:117983:141165141165141647483Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscription elongation factor GreA1e-1069.3
NC_014654:2138794:215410021541002154582483Halanaerobium sp. 'sapolanicus' chromosome, complete genometranscription elongation factor GreA1e-1069.3
NC_010830:923266:943068943068943541474Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-1068.9
NC_002162:333303:348924348924349394471Ureaplasma parvum serovar 3 str. ATCC 700970, complete genometranscription elongation factor2e-1068.6
NC_012918:2668031:268448226844822684958477Geobacter sp. M21 chromosome, complete genometranscription elongation factor GreA2e-1068.6
NC_010723:173280:189795189795190277483Clostridium botulinum E3 str. Alaska E43, complete genometranscription elongation factor GreA4e-1067.8
NC_019904:186056:197731197731198204474Echinicola vietnamensis DSM 17526 chromosome, complete genometranscription elongation factor GreA4e-1067.4
NC_014377:149288:156753156753157229477Thermosediminibacter oceani DSM 16646 chromosome, complete genomeGreA/GreB family elongation factor5e-1067.4
NC_014125:3054000:307473530747353075202468Legionella pneumophila 2300/99 Alcoy chromosome, complete genometranscription elongation factor GreA5e-1067
NC_009494:3119997:314076331407633141245483Legionella pneumophila str. Corby chromosome, complete genometranscription elongation factor GreA6e-1067
NC_016811:2903871:292463829246382925120483Legionella pneumophila subsp. pneumophila ATCC 43290 chromosome,transcription elongation factor GreA8e-1066.6
NC_002942:2943206:296397329639732964455483Legionella pneumophila subsp. pneumophila str. Philadelphia 1,transcription elongation factor GreA8e-1066.6
NC_006368:3028286:305123230512323051714483Legionella pneumophila str. Paris, complete genometranscription elongation factor GreA8e-1066.6
NC_008262:2649289:268678126867812687257477Clostridium perfringens SM101, complete genometranscription elongation factor GreA1e-0966.2
NC_003485:316679:337232337232337762531Streptococcus pyogenes MGAS8232, complete genometranscription elongation factor GreA2e-0965.9
NC_014909:86000:108865108865109347483Candidatus Blochmannia vafer str. BVAF chromosome, complete genometranscription elongation factor GreA2e-0965.5
NC_019903:83857:939689396894438471Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,transcription elongation factor GreA2e-0965.1
NC_018867:361423:365767365767366237471Dehalobacter sp. CF chromosome, complete genomeTranscription elongation factor GreA4e-0964.3
NC_011025:183287:190603190603191082480Mycoplasma arthritidis 158L3-1, complete genometranscription elongation factor4e-0964.3
NC_005061:96536:104321104321104809489Candidatus Blochmannia floridanus, complete genometranscription elongation factor, cleaves 3' nucleotide of paused mRNA4e-0964.3
NC_020995:2255521:225885522588552259334480Enterococcus casseliflavus EC20, complete genometranscription elongation factor greA7e-0963.5
NC_007503:2098980:212128221212822121755474Carboxydothermus hydrogenoformans Z-2901, complete genometranscription elongation factor GreA8e-0963.2
NC_014960:1735786:178532517853251785792468Anaerolinea thermophila UNI-1, complete genometranscription elongation factor GreA3e-0861.6
NC_013895:1086500:109919910991991099681483Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completetranscription elongation factor GreA3e-0861.6
NC_016584:85543:914739147391943471Desulfosporosinus orientis DSM 765 chromosome, complete genometranscription elongation factor GreA3e-0861.2
NC_012997:3185248:320821132082113208729519Teredinibacter turnerae T7901, complete genometranscription elongation factor GreB4e-0861.2
NC_017271:3057161:306004130600413060547507Xanthomonas campestris pv. raphani 756C chromosome, completetranscription elongation factor GreB7e-0860.1
NC_006370:166000:187189187189187659471Photobacterium profundum SS9 chromosome 1, complete sequencetranscription elongation factor GreB1e-0759.3
NC_012806:818592:833987833987834472486Mycoplasma conjunctivae, complete genomeTranscription elongation factor4e-0757.4
NC_010718:128423:133411133411133905495Natranaerobius thermophilus JW/NM-WN-LF, complete genometranscription elongation factor GreA7e-0757
NC_016111:4115097:411698941169894117486498Streptomyces cattleya NRRL 8057, complete genomeTranscription elongation factor greA7e-0757
NC_008322:4611000:461745746174574617942486Shewanella sp. MR-7, complete genometranscription elongation factor GreB1e-0655.8
NC_008095:3719441:373264237326423733172531Myxococcus xanthus DK 1622, complete genometranscription elongation factor GreB7e-0653.5
NC_013124:1606879:160831316083131608795483Acidimicrobium ferrooxidans DSM 10331, complete genomeGreA/GreB family elongation factor8e-0653.1
NC_017093:835260:855594855594856088495Actinoplanes missouriensis 431, complete genomeputative transcription elongation factor9e-0653.1