Pre_GI Gene

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Host: NC_011004 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011004:4947980 Rhodopseudomonas palustris TIE-1, complete genome

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
49471414947983843ABC-2 type transporterQuickGO ontologyBLASTP
494798049492301251ABC transporter relatedQuickGO ontologyBLASTP
49493304949806477methyltransferaseQuickGO ontology
494985949517961938asparagine synthase glutamine-hydrolyzingQuickGO ontologyBLASTP
495180749549053099glycosyl transferase family 2QuickGO ontologyBLASTP
495496849561581191hypothetical proteinBLASTP
49571434957409267transposase IS3IS911 family proteinQuickGO ontologyBLASTP
49574034958326924Integrase catalytic regionQuickGO ontologyBLASTP
495922149602581038acyltransferase 3QuickGO ontologyBLASTP
49616504961994345hypothetical proteinBLASTP
49620284962273246hypothetical proteinBLASTP
49625074962923417methionine-R-sulfoxide reductaseQuickGO ontologyBLASTP
49629544963664711peptide methionine sulfoxide reductaseQuickGO ontologyBLASTP
4963974496404875tRNA-OTHERQuickGO ontology
496422449675533330carbamoyl-phosphate synthase large subunitQuickGO ontologyBLASTP
49677774968253477transcription elongation factor GreAQuickGO ontologyBLASTP
49684324968842411DoxX family proteinQuickGO ontologyBLASTP
49688794969361483transcriptional regulator AsnC familyQuickGO ontologyBLASTP
49696184970583966thioredoxin reductaseQuickGO ontologyBLASTP