Pre_GI Gene

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Host: NC_013716 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013716:4885776 Citrobacter rodentium ICC168, complete genome

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
48857764886747972octaprenyl-diphosphate synthaseQuickGO ontologyBLASTP
4887007488731831250S ribosomal subunit protein L21QuickGO ontologyBLASTP
4887338488759525850S ribosomal subunit protein L27QuickGO ontologyBLASTP
48877254888690966hypothetical proteinBLASTP
488870648898781173probable GTP-binding proteinQuickGO ontologyBLASTP
489000448923282325putative phosphoglycerol transferaseQuickGO ontologyBLASTP
489236048937931434penicillin-binding protein 4 includes D-alanyl-D-alanine carboxypeptidase D-alanyl-D-alanine-endopeptidaseQuickGO ontologyBLASTP
48940374894513477transcription elongation factorQuickGO ontologyBLASTP
48946694895001333hypothetical proteinBLASTP
48950894895718630cell division proteinQuickGO ontologyBLASTP
489581848977491932cell division proteinQuickGO ontologyBLASTP
48978364898684849dihydropteroate synthaseQuickGO ontologyBLASTP
489867749000141338phosphoglucosamine mutaseQuickGO ontologyBLASTP
49004154901131717putative Type IV pilinQuickGO ontologyBLASTP
490125049031331884putative Type IV pilus biogenesis proteinQuickGO ontologyBLASTP
49031644903595432putative Type IV pilus biogenesis proteinQuickGO ontologyBLASTP
490360349050721470putative Type IV pilus biogenesis proteinQuickGO ontologyBLASTP
49050854905627543putative Type IV pilus biogenesis proteinQuickGO ontologyBLASTP