Pre_GI Gene

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Host: NC_016848 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016848:12548 Treponema pallidum subsp. pertenue str. CDC2 chromosome, complete

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Akorabo, Ghana in 1980. Treponema pallidum subsp. pertenue causes chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1237512551177hypothetical proteinBLASTP
12548137801233lipoproteinQuickGO ontologyBLASTP
13971157851815phenylalanine--tRNA ligase beta subunitQuickGO ontologyBLASTP
15748183212574S16 family endopeptidase LaQuickGO ontologyBLASTP
1840919356948TPR domain-containing proteinQuickGO ontologyBLASTP
19373220542682transcription elongation factor GreAQuickGO ontologyBLASTP
22054241772124hypothetical proteinBLASTP
243462443388tRNA-SerQuickGO ontologyBLASTP
244902457889tRNA-SerQuickGO ontologyBLASTP
248682495285tRNA-SerQuickGO ontologyBLASTP
2511525381267hypothetical proteinBLASTP
25459275042046hypothetical proteinBLASTP
27565288961332NSS family amino acidsodium Na symporterQuickGO ontologyBLASTP
2907629786711Trk family potassium K transporter NAD binding proteinQuickGO ontologyBLASTP
29865329363072M16C subfamily peptidaseQuickGO ontologyBLASTP