Pre_GI: BLASTP Hits

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Query: NC_016843:950000:967203 Treponema pallidum subsp. pertenue str. Gauthier chromosome,

Start: 967203, End: 968030, Length: 828

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Brazzaville, the Republic of Congo in 1960. Treponema pallidum subsp. pertenue causes chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021508:949769:966965966965967792828Treponema pallidum subsp. pallidum SS14, complete genomebifunctional riboflavin kinase/FAD synthetase4e-138490
NC_017268:949543:966739966739967566828Treponema pallidum subsp. pallidum str. Chicago chromosome,riboflavin kinase/FMN adenylyltransferase4e-138490
NC_016848:950353:967549967549968376828Treponema pallidum subsp. pertenue str. CDC2 chromosome, completebifunctional riboflavin kinase/FAD synthetase4e-138490
NC_016844:950231:967427967427968254828Treponema pallidum subsp. pallidum DAL-1 chromosome, completebifunctional riboflavin kinase/FAD synthetase4e-138490
NC_016842:949899:967095967095967922828Treponema pallidum subsp. pertenue str. SamoaD chromosome, completebifunctional riboflavin kinase/FAD synthetase4e-138490
NC_000919:948287:965483965483966310828Treponema pallidum subsp. pallidum str. Nichols, complete genomeriboflavin kinase/FMN adenylyltransferase (ribF)4e-138490
NC_010741:949732:966928966928967755828Treponema pallidum subsp. pallidum SS14, complete genomeriboflavin kinase/FMN adenylyltransferase4e-138490
NC_015714:943178:960374960374961201828Treponema paraluiscuniculi Cuniculi A chromosome, complete genomebifunctional riboflavin kinase/FAD synthetase2e-137488
NC_009052:1211989:121361412136141214549936Shewanella baltica OS155, complete genomeriboflavin biosynthesis protein RibF5e-1375.1
NC_009997:1368471:136847113684711369406936Shewanella baltica OS195, complete genomeriboflavin biosynthesis protein RibF5e-1375.1
NC_016901:1367443:136906813690681370003936Shewanella baltica OS678 chromosome, complete genomeriboflavin biosynthesis protein RibF5e-1375.1
NC_009665:1332751:133275113327511333686936Shewanella baltica OS185 chromosome, complete genomeriboflavin biosynthesis protein RibF6e-1374.7
NC_004061:146862:160207160207161145939Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeriboflavin biosynthesis protein RibF2e-1273.6
NC_004347:3670145:368866336886633689598936Shewanella oneidensis MR-1, complete genomeriboflavin biosynthesis protein RibF3e-1272.8
NC_009092:1263964:126610312661031267038936Shewanella loihica PV-4, complete genomeriboflavin biosynthesis protein RibF3e-1272.4
NC_008322:3585601:360432036043203605255936Shewanella sp. MR-7, complete genomeriboflavin biosynthesis protein RibF3e-1272.4
NC_008261:2157713:217408621740862175015930Clostridium perfringens ATCC 13124, complete genomeriboflavin biosynthesis protein RibF3e-1272.4
NC_008262:1835613:184813418481341849063930Clostridium perfringens SM101, complete genomeriboflavin biosynthesis protein RibF3e-1272.4
NC_009901:1309724:130972413097241310659936Shewanella pealeana ATCC 700345, complete genomeriboflavin biosynthesis protein RibF4e-1272
NC_007298:3271071:329125732912573292177921Dechloromonas aromatica RCB, complete genomeRiboflavin kinase / FAD synthetase:Cytidyltransferase-related2e-1169.7
NC_008700:1115436:111543611154361116371936Shewanella amazonensis SB2B, complete genomeriboflavin biosynthesis protein RibF5e-1168.6
NC_009800:12162:247032470325644942Escherichia coli HS, complete genomeriboflavin biosynthesis protein RibF2e-1066.6
NC_002655:12000:258192581926760942Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-1066.6
CP002185:11921:246352463525576942Escherichia coli W, complete genomebifunctional riboflavin kinase/FAD synthetase2e-1066.6
NC_007384:16500:285732857329514942Shigella sonnei Ss046, complete genomeputative regulator2e-1066.6
NC_011751:12000:257652576526706942Escherichia coli UMN026 chromosome, complete genomebifunctional riboflavin kinase/FMN adenylyltransferase2e-1066.6
NC_002695:12000:258182581826759942Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-1066.6
NC_011750:12047:296182961830559942Escherichia coli IAI39 chromosome, complete genomebifunctional riboflavin kinase/FMN adenylyltransferase2e-1066.6
NC_011748:11394:233682336824309942Escherichia coli 55989, complete genomebifunctional riboflavin kinase/FMN adenylyltransferase2e-1066.6
CU928160:11381:233562335624297942Escherichia coli IAI1 chromosome, complete genomebifunctional riboflavin kinase and FAD synthetase2e-1066.6
CU928145:11394:233682336824309942Escherichia coli 55989 chromosome, complete genomebifunctional riboflavin kinase and FAD synthetase2e-1066.6
CP002516:4081484:408632640863264087267942Escherichia coli KO11, complete genomeriboflavin biosynthesis protein RibF2e-1066.6
NC_013361:11382:233652336524306942Escherichia coli O26:H11 str. 11368 chromosome, complete genomebifunctional riboflavin kinase/FMN adenylyltransferase2e-1066.6
AP010958:12660:246342463425575942Escherichia coli O103:H2 str. 12009 DNA, complete genomebifunctional riboflavin kinase and FAD synthetase2e-1066.6
NC_009801:11921:246222462225563942Escherichia coli E24377A, complete genomeriboflavin biosynthesis protein RibF2e-1066.6
NC_012967:12161:254792547926420942Escherichia coli B str. REL606 chromosome, complete genomebifunctional riboflavin kinase/FMN adenylyltransferase2e-1066.6
NC_012947:3753375:375730237573023758243942Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completebifunctional riboflavin kinase/FMN adenylyltransferase2e-1066.6
NC_010468:3970995:397587439758743976815942Escherichia coli ATCC 8739, complete genomeriboflavin biosynthesis protein RibF2e-1066.6
NC_016902:4081484:408632640863264087267942Escherichia coli KO11FL chromosome, complete genomeriboflavin biosynthesis protein RibF2e-1066.6
NC_016822:15401:277932779328734942Shigella sonnei 53G, complete genomebifunctional riboflavin kinase/FMN adenylyltransferase2e-1066.6
NC_013941:12000:258002580026741942Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeriboflavin biosynthesis protein RibF2e-1066.6
NC_013364:11382:233502335024291942Escherichia coli O111:H- str. 11128, complete genomebifunctional riboflavin kinase and FAD synthetase2e-1066.6
NC_013353:12660:246342463425575942Escherichia coli O103:H2 str. 12009, complete genomebifunctional riboflavin kinase and FAD synthetase2e-1066.6
NC_013008:11938:258192581926760942Escherichia coli O157:H7 str. TW14359 chromosome, complete genomebifunctional riboflavin kinase/FMN adenylyltransferase2e-1066.6
NC_011741:11381:233562335624297942Escherichia coli IAI1 chromosome, complete genomebifunctional riboflavin kinase/FMN adenylyltransferase2e-1066.6
NC_011415:11381:233542335424295942Escherichia coli SE11 chromosome, complete genomebifunctional riboflavin kinase/FMN adenylyltransferase2e-1066.6
NC_011353:12000:258192581926760942Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebifunctional riboflavin kinase/FMN adenylyltransferase2e-1066.6
NC_017256:144854:159598159598160533936Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,FMN adenylyltransferase3e-1065.9
NC_002528:148274:159484159484160425942Buchnera aphidicola str. APS (Acyrthosiphon pisum), completeFMN adenylyltransferase3e-1065.9
NC_011833:147426:159502159502160443942Buchnera aphidicola str. 5A (Acyrthosiphon pisum) chromosome,FMN adenylyltransferase3e-1065.9
NC_014394:2228470:222753022275302228501972Gallionella capsiferriformans ES-2 chromosome, complete genomeriboflavin biosynthesis protein RibF4e-1065.5
NC_017254:156215:159535159535160476942Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) chromosome,FMN adenylyltransferase1e-0963.9
NC_017253:155170:159515159515160456942Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,FMN adenylyltransferase1e-0963.9
NC_017252:155166:159512159512160453942Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) chromosome,FMN adenylyltransferase1e-0963.9
NC_011834:156197:159518159518160459942Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) chromosome,FMN adenylyltransferase1e-0963.9
NC_008260:497855:497855497855498832978Alcanivorax borkumensis SK2, complete genomeFAD pyrophosphorylase1e-0963.9
NC_017255:156195:159515159515160456942Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) chromosome,FMN adenylyltransferase1e-0963.9
NC_011901:3363500:336357233635723364498927Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeriboflavin biosynthesis protein RibF1e-0963.9
NC_011979:3712845:373410237341023735061960Geobacter sp. FRC-32, complete genomeriboflavin biosynthesis protein RibF6e-0961.6
NC_014532:349384:3678113678113688421032Halomonas elongata DSM 2581, complete genomebifunctional riboflavin kinase/FMN adenylyltransferase8e-0961.2
NC_011283:4767269:478837647883764789314939Klebsiella pneumoniae 342 chromosome, complete genomebifunctional riboflavin kinase/FMN adenylyltransferase2e-0860.1
NC_013850:4612812:463391946339194634857939Klebsiella variicola At-22 chromosome, complete genomeriboflavin biosynthesis protein RibF2e-0860.1
NC_015312:6398931:641285064128506413689840Pseudonocardia dioxanivorans CB1190 chromosome, complete genomecytidyltransferase-related domain-containing protein2e-0859.7
NC_006361:4098469:410328641032864104245960Nocardia farcinica IFM 10152, complete genomehypothetical protein3e-0859.3
NC_017353:1699652:170412417041241705095972Staphylococcus lugdunensis N920143, complete genomeputative riboflavin biosynthesis diaminohydroxyphosphoribosylaminopyrimidine deaminase5e-0858.5
NC_009439:1075170:107517010751701076120951Pseudomonas mendocina ymp, complete genomebifunctional riboflavin kinase/FMN adenylyltransferase5e-0858.5
NC_007907:2879568:287956828795682880524957Desulfitobacterium hafniense Y51, complete genomeFAD synthase5e-0858.5
NC_004461:921364:953120953120954091972Staphylococcus epidermidis ATCC 12228, complete genomeFAD synthase RibC5e-0858.2
NC_010102:25893:472684726848155888Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-0858.2
NC_012438:132456:145056145056145991936Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeriboflavin biosynthesis protein RibF9e-0857.8
NC_015312:3290887:330723433072343308028795Pseudonocardia dioxanivorans CB1190 chromosome, complete genomecytidyltransferase-related domain-containing protein9e-0857.8
NC_008463:5364428:538227053822705383208939Pseudomonas aeruginosa UCBPP-PA14, complete genomeriboflavin kinase/FAD synthase1e-0757.4
NC_015410:1144272:114337611433761144275900Pseudomonas mendocina NK-01 chromosome, complete genomebifunctional riboflavin kinase/FMN adenylyltransferase2e-0756.6
NC_018080:5192264:521121452112145212152939Pseudomonas aeruginosa DK2 chromosome, complete genomebifunctional riboflavin kinase/FMN adenylyltransferase2e-0756.6
NC_013730:933089:956010956010956939930Spirosoma linguale DSM 74, complete genomeriboflavin biosynthesis protein RibF3e-0756.2
NC_016632:170000:196248196248197216969Serratia symbiotica str. 'Cinara cedri' chromosome, completeriboflavin kinase, FMN adenylyltransferase3e-0755.8
NC_010995:3821327:3843086384308638441201035Cellvibrio japonicus Ueda107, complete genomeriboflavin biosynthesis protein RibF4e-0755.5
NC_019907:287339:287901287901288875975Liberibacter crescens BT-1 chromosome, complete genomeRiboflavin kinase / FMN adenylyltransferase4e-0755.5
NC_011830:3904034:390685539068553907811957Desulfitobacterium hafniense DCB-2, complete genomeriboflavin biosynthesis protein RibF6e-0755.1
NC_020134:1173000:118466711846671185635969Clostridium stercorarium subsp. stercorarium DSM 8532, completebifunctional riboflavin kinase/FMN adenylyltransferase RibF7e-0754.7
NC_006155:713174:731075731075732013939Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein4e-0652.4
NC_008149:402599:422968422968423906939Yersinia pestis Nepal516, complete genomeriboflavin biosynthesis protein: riboflavin kinase and FMN adenyltransferase4e-0652.4
NC_015161:354000:357738357738358628891Deinococcus proteolyticus MRP chromosome, complete genomeriboflavin biosynthesis protein RibF7e-0651.2