Pre_GI Gene

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Host: NC_013364 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013364:11382 Escherichia coli O111:H- str. 11128, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1138211786405hypothetical proteinBLASTP
12163140791917chaperone Hsp70QuickGO ontologyBLASTP
14168152831116chaperone Hsp40QuickGO ontologyBLASTP
1538715539153small toxic membrane peptide HokCQuickGO ontologyBLASTP
16125172911167sodium-proton antiporter NhaAQuickGO ontologyBLASTP
1735118256906DNA-binding transcriptional activator NhaRQuickGO ontologyBLASTP
20852222731422T3SS effector-like protein EspXQuickGO ontologyBLASTP
227572302026430S ribosomal protein S20QuickGO ontologyBLASTP
2312323353231hypothetical proteinBLASTP
2335024291942bifunctional riboflavin kinase and FAD synthetaseQuickGO ontologyBLASTP
24334271502817isoleucyl-tRNA synthetaseQuickGO ontologyBLASTP
2715027644495prolipoprotein signal peptidaseQuickGO ontologyBLASTP
2773228181450FKBP-type peptidyl-prolyl cis-trans isomeraseQuickGO ontologyBLASTP
28183291339511-hydroxy-2-methyl-2-E-butenyl 4-diphosphate synthaseQuickGO ontologyBLASTP
2919930113915ribonucleoside hydrolase 3QuickGO ontologyBLASTP
3028031101822dihydrodipicolinate reductaseQuickGO ontologyBLASTP