Pre_GI Gene

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Host: NC_013941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:12000 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
12162140781917molecular chaperone DnaKQuickGO ontologyBLASTP
14167152971131molecular chaperone DnaJQuickGO ontologyBLASTP
1540115610210Gef proteinQuickGO ontologyBLASTP
16139173051167Sodiumproton antiporter nhaAQuickGO ontologyBLASTP
1736518270906DNA-binding transcriptional activatorQuickGO ontologyBLASTP
1830819267960hypothetical proteinBLASTP
19280217302451usher proteinQuickGO ontologyBLASTP
2174322426684Gram-negative pilus assembly chaperoneQuickGO ontologyBLASTP
2247623009534type-1 fimbrial proteinQuickGO ontologyBLASTP
23311247321422hypothetical proteinBLASTP
252022546526430S ribosomal protein S20QuickGO ontologyBLASTP
2556825792225hypothetical proteinBLASTP
2580026741942riboflavin biosynthesis protein RibFQuickGO ontologyBLASTP
26784296002817Isoleucyl-tRNA synthetaseQuickGO ontologyBLASTP
2960030094495lipoprotein signal peptidaseQuickGO ontologyBLASTP
3018230631450FKBP-type 16 kDa peptidyl-prolyl cis-trans isomeraseQuickGO ontologyBLASTP
30633315839514-hydroxy-3-methylbut-2-enyl diphosphate reductaseQuickGO ontologyBLASTP
3164932563915Non-specific ribonucleoside hydrolase rihCQuickGO ontologyBLASTP
3273033551822dihydrodipicolinate reductaseQuickGO ontologyBLASTP