Pre_GI Gene

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Host: NC_011353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011353:12000 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
12180140961917molecular chaperone DnaKQuickGO ontologyBLASTP
14185153151131chaperone protein DnaJQuickGO ontologyBLASTP
1541915571153Hokgef family proteinQuickGO ontologyBLASTP
16157173231167pH-dependent sodiumproton antiporterQuickGO ontologyBLASTP
1738318288906transcriptional activator NhaRQuickGO ontologyBLASTP
1832618853528hypothetical proteinBLASTP
2176222445684pili assembly chaperoneQuickGO ontologyBLASTP
2249523028534fimbrial proteinQuickGO ontologyBLASTP
23330247511422hypothetical proteinBLASTP
252212548426430S ribosomal protein S20QuickGO ontologyBLASTP
2581926760942bifunctional riboflavin kinaseFMN adenylyltransferaseQuickGO ontologyBLASTP
26803296192817isoleucyl-tRNA synthetaseQuickGO ontologyBLASTP
2961930113495lipoprotein signal peptidaseQuickGO ontologyBLASTP
3020130650450FKBP-type 16 kDa peptidyl-prolyl cis-trans isomeraseQuickGO ontologyBLASTP
30652316029514-hydroxy-3-methylbut-2-enyl diphosphate reductaseQuickGO ontologyBLASTP
3166832582915ribonucleoside hydrolase RihCQuickGO ontologyBLASTP
3274933570822dihydrodipicolinate reductaseQuickGO ontologyBLASTP
3384933986138hypothetical proteinBLASTP
34026351741149carbamoyl phosphate synthase small subunitQuickGO ontologyBLASTP