Pre_GI Gene

Some Help

Host: NC_016842 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016842:949899 Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Western Samoa in 1953. Treponema pallidum subsp. pertenue causes the chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
949899950756858flagellar filament core protein FlaBQuickGO ontologyBLASTP
950817950978162hypothetical proteinBLASTP
9510549532222169flagellar hook-associated protein FliDQuickGO ontologyBLASTP
953222953836615hypothetical proteinBLASTP
953833954108276hypothetical proteinBLASTP
954148954555408hypothetical proteinBLASTP
954602955267666hypothetical proteinBLASTP
9552729563691098HD domain-containing proteinQuickGO ontologyBLASTP
956382957341960hypothetical proteinBLASTP
9573389588191482GldG domain proteinQuickGO ontologyBLASTP
958816959541726ABC superfamily ATP binding cassette transporter membrane proteinQuickGO ontologyBLASTP
959531960337807ABC superfamily ATP binding cassette transporter ABC proteinQuickGO ontologyBLASTP
9604169619181503HEAT repeat domain-containing proteinQuickGO ontologyBLASTP
9618849630021119hypothetical proteinBLASTP
9629999640961098hypothetical proteinBLASTP
964117964557441dUTP diphosphataseQuickGO ontologyBLASTP
9645549666622109polyribonucleotide nucleotidyltransferaseQuickGO ontologyBLASTP
96681096707927030S ribosomal protein S15QuickGO ontologyBLASTP
967095967922828bifunctional riboflavin kinaseFAD synthetaseQuickGO ontologyBLASTP