Pre_GI Gene

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Host: NC_016848 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016848:950353 Treponema pallidum subsp. pertenue str. CDC2 chromosome, complete

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Akorabo, Ghana in 1980. Treponema pallidum subsp. pertenue causes chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
950353951210858flagellar filament core protein FlaBQuickGO ontologyBLASTP
951271951432162hypothetical proteinBLASTP
9515089536762169flagellar hook-associated protein FliDQuickGO ontologyBLASTP
953676954290615hypothetical proteinBLASTP
954287954562276hypothetical proteinBLASTP
954602955009408hypothetical proteinBLASTP
955056955721666hypothetical proteinBLASTP
9557269568231098HD domain-containing proteinQuickGO ontologyBLASTP
956836957795960hypothetical proteinBLASTP
9577929592731482GldG domain proteinQuickGO ontologyBLASTP
959270959995726ABC superfamily ATP binding cassette transporter membrane proteinQuickGO ontologyBLASTP
959985960791807ABC superfamily ATP binding cassette transporter ABC proteinQuickGO ontologyBLASTP
9608709623721503HEAT repeat domain-containing proteinQuickGO ontologyBLASTP
9623389634561119hypothetical proteinBLASTP
9634539645501098hypothetical proteinBLASTP
964571965011441dUTP diphosphataseQuickGO ontologyBLASTP
9650089671162109polyribonucleotide nucleotidyltransferaseQuickGO ontologyBLASTP
96726496753327030S ribosomal protein S15QuickGO ontologyBLASTP
967549968376828bifunctional riboflavin kinaseFAD synthetaseQuickGO ontologyBLASTP