Pre_GI Gene

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Host: NC_009901 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009901:1309724 Shewanella pealeana ATCC 700345, complete genome

Host Lineage: Shewanella pealeana; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This species was isolated from a microbial community colonizing the accessory nidamental gland of the squid Loligo peali (Atlantic squid) for their capacity to respire on sulfur. It was placed in the Shewanella genus based on physiological and biochemical characteristics and 16S rRNA sequence analysis. Shewanella are ubiquitous in marine environment and play very important role in global carbon and nitrogen cycle. The present strain is moderately halophilic, requiring sodium ions for growth. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
13097241310659936riboflavin biosynthesis protein RibFQuickGO ontologyBLASTP
131069113135132823isoleucyl-tRNA synthetaseQuickGO ontologyBLASTP
13136341314146513lipoprotein signal peptidaseQuickGO ontologyBLASTP
13141521314574423peptidylprolyl isomerase FKBP-typeQuickGO ontologyBLASTP
13145771315506930hydroxymethylbutenyl pyrophosphate reductaseQuickGO ontologyBLASTP
13157491316309561type IV pilus modification protein PilVQuickGO ontologyBLASTP
13163141317303990type IV pilus assembly protein PilWQuickGO ontologyBLASTP
13173141317751438type IV pilus assembly protein PilXQuickGO ontologyBLASTP
131775413213383585type IV pilin biogenesis protein putativeQuickGO ontologyBLASTP
13213471321739393methylation site containing proteinQuickGO ontologyBLASTP
13217901322041252conserved hypothetical proteinBLASTP
13220861322622537type IV pilus biogenesis protein putativeQuickGO ontologyBLASTP
13227851323297513type IV pilus biogenesis protein putativeQuickGO ontologyBLASTP
13235451323883339nitrogen regulatory protein P-IIQuickGO ontologyBLASTP
132397913249951017transcriptional regulator LacI familyQuickGO ontologyBLASTP
132541613280252610TonB-dependent receptorQuickGO ontologyBLASTP
132819213297181527tryptophan halogenaseQuickGO ontologyBLASTP
13297851330513729SapC family proteinQuickGO ontologyBLASTP
133128213340022721Beta-N-acetylhexosaminidaseQuickGO ontologyBLASTP