Pre_GI Gene

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Host: NC_013361 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013361:11382 Escherichia coli O26:H11 str. 11368 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli O26:H11 str. 11368 is a human enterohemorrhagic E. coli which attaches to and effaces cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1138211786405hypothetical proteinBLASTP
12163140791917molecular chaperone DnaKQuickGO ontologyBLASTP
14168152981131molecular chaperone DnaJQuickGO ontologyBLASTP
1540215554153small toxic membrane peptide HokCQuickGO ontologyBLASTP
16140173061167pH-dependent sodiumproton antiporterQuickGO ontologyBLASTP
1736618271906transcriptional activator NhaRQuickGO ontologyBLASTP
20868222891422T3SS effector EspXQuickGO ontologyBLASTP
227732303626430S ribosomal protein S20QuickGO ontologyBLASTP
2313923357219hypothetical proteinBLASTP
2336524306942bifunctional riboflavin kinaseFMN adenylyltransferaseQuickGO ontologyBLASTP
24349271652817isoleucyl-tRNA synthetaseQuickGO ontologyBLASTP
2716527659495lipoprotein signal peptidaseQuickGO ontologyBLASTP
2774728196450FKBP-type peptidylprolyl isomeraseQuickGO ontologyBLASTP
28198291489514-hydroxy-3-methylbut-2-enyl diphosphate reductaseQuickGO ontologyBLASTP
2921430128915ribonucleoside hydrolase RihCQuickGO ontologyBLASTP
3029531116822dihydrodipicolinate reductaseQuickGO ontologyBLASTP