Pre_GI Gene

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Host: NC_010102 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010102:25893 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
25893285142622hypothetical proteinBLASTP
28515295221008hypothetical proteinBLASTP
2952330068546hypothetical proteinBLASTP
3008430602519hypothetical proteinBLASTP
3069330830138hypothetical protein
3081431299486hypothetical proteinBLASTP
3136232207846hypothetical proteinBLASTP
3224632533288hypothetical proteinBLASTP
3263333082450hypothetical proteinBLASTP
3324233370129hypothetical protein
3383034021192hypothetical proteinBLASTP
3409534541447hypothetical proteinBLASTP
3454434663120hypothetical protein
3472834862135hypothetical protein
3516035762603hypothetical proteinBLASTP
35783372761494hypothetical proteinBLASTP
37380385761197hypothetical proteinBLASTP
38594398471254hypothetical proteinBLASTP
40535417011167hypothetical proteinBLASTP
4176942662894hypothetical proteinBLASTP
42717447562040hypothetical proteinBLASTP
44796462111416hypothetical proteinBLASTP
4662546810186hypothetical proteinBLASTP
4706347209147hypothetical proteinBLASTP
4726848155888hypothetical proteinBLASTP