Pre_GI Gene

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Host: NC_000919 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_000919:948287 Treponema pallidum subsp. pallidum str. Nichols, complete genome

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was originally isolated in 1912 from a neurosyphilitic patient and is virulent. This organism is the causative agent of endemic and venereal syphilis. This sexual transmitted disease was first discovered in Europe at the end of the fifteenth century, however, the causative agent was not identified until 1905. At one time syphilis was the third most commonly reported communicable disease in the USA. Syphilis is characterized by multiple clinical stages and long periods of latent, asymptomatic infection. Although effective therapies have been available since the introduction of penicillin, syphilis remains a global health problem. This organisms is divided into subspecies each of which causes a specific disease. T. pallidum causes the venereal disease syphilis. T. pertenue, T. carateum and T. endemicum cause the skin infections yaws, pinta and bejel, respectively.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
948287949144858flagellar filament 31 kDa core protein flaB3QuickGO ontologyBLASTP
949205949366162hypothetical proteinBLASTP
9494429516102169flagellar hook-associated proteinQuickGO ontologyBLASTP
951622952224603hypothetical proteinBLASTP
952221952496276hypothetical proteinBLASTP
952536952943408hypothetical proteinBLASTP
952990953655666hypothetical proteinBLASTP
9536609547571098hypothetical proteinBLASTP
954770955720951hypothetical proteinBLASTP
9557269572071482hypothetical proteinBLASTP
957204957929726membrane spanning protein putativeQuickGO ontologyBLASTP
957919958725807ABC transporter ATP-binding protein natAQuickGO ontologyBLASTP
9588049603061503hypothetical proteinBLASTP
9602729613691098hypothetical proteinBLASTP
9613879624751089hypothetical proteinBLASTP
962505962945441deoxyuridine 5-triphosphate nucleotidohydrolase dutQuickGO ontologyBLASTP
9629429650502109polyribonucleotide nucleotidyltransferase pnpQuickGO ontologyBLASTP
965198965467270ribosomal protein S15 rpsOQuickGO ontologyBLASTP
965483966310828riboflavin kinaseFMN adenylyltransferase ribFQuickGO ontologyBLASTP
9663149674141101tRNA pseudouridine 55 synthase truBQuickGO ontologyBLASTP
967392967772381ribosome-binding factor A rbfAQuickGO ontologyBLASTP
9677699702972529translation initiation factor IF-2QuickGO ontologyBLASTP